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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gcs1_

Fold library idPDB HeaderMoleculeTitle
c6gcs1_4.32PDB header: oxidoreductaseChain: 1: PDB Molecule: nd1 subunit (nu1m);


Added to library: Sat Oct 13 08:50:31 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MIINIVEILIFLVCVLFSVAYLTVAERKTLAYMQRRLGPNFVGYYGLLQAFADAVKLLLKEIVLPKESNY
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Known secondary structure (DSSP)

TTS

S

STTTSS
SS




TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IILVISPLITLITALIGWVVIPLGPGITLGELNLGILFSLAIGSLGVFGSLLSGWSSNSKYSLLGSIRST
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Known secondary structure (DSSP) TTTTGGGGG
TT
SSS

S

S

GGG
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AQLISYELILTSIFIIIIMFVSSLNITTIIETQRVVWYCIPLLPLLLIFFIASVAETARPPFDLTESESE
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Known secondary structure (DSSP) TTGGGGT


STTTTTTTTS
TTTT
SS

TT

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LVAGYFTEYSGSPFVFFFLAEYSNIILISAFNGYLLLGGYLSFNYSYLFNILFNDYSYVSFLFEGLINSS
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Known secondary structure (DSSP) SSS
SS



STTTTSS
GGGGTGGGT
SS
STTTT
 .........290.........300.........310.........320.........330.........340
Sequence AYAIKLVFLMFSFIWVRAAFPRFTYDNLINFCWIILLPLLFGIFLIIPSTLYIFDSFPTL
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Known secondary structure (DSSP) TTS



TTS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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