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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6g9fA_

Fold library idPDB HeaderMoleculeTitle
c6g9fA_2.35PDB header: hydrolase/antibioticChain: A: PDB Molecule: peptidoglycan d,d-transpeptidase mrda;


Added to library: Sat May 25 08:53:21 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTLDALRSVVDLTDDDIAAFRKERARS
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TTS

GGG
S



TS
 .........80.........90.........100.........110.........120.........130.........140
Sequence HRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKL
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Known secondary structure (DSSP)
TT


S

GGG
TT
TTGGGG



TT
G
 .........150.........160.........170.........180.........190.........200.........210
Sequence ANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLL
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Known secondary structure (DSSP) GGGTT


ST

TT






S

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence AGSRAAVVVTDPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKPYV
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Known secondary structure (DSSP) TTS
TTTTS


TT


T
TT
TTS


B

GGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence AVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFFYQVAYDMGIDRLSE
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Known secondary structure (DSSP) TS

TT


S
TTSS

SSTT


T
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence WMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDG
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Known secondary structure (DSSP) TTTTS



S
S




B


S



TTT
TT
BB
TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence IVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIHSGYWELAKDGMYGVANRPNGTAHKYFASAPYKIAAKSG
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Known secondary structure (DSSP)




B

SSS









SS
SSSSSTTSTTTT
SS

 .........500.........510.........520.........530.........
Sequence TAQLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGTLMRQILDHIML
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Known secondary structure (DSSP)




SSS

GGG
SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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