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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6g7eB_

Fold library idPDB HeaderMoleculeTitle
c6g7eB_3.21PDB header: transcriptionChain: B: PDB Molecule: helicase-like protein;


Added to library: Sat Oct 20 09:33:45 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATRLDRLVTILETGSTRLIRDTAVNQLADWQKQHPEELFNLLSRVVPYLRHKDWETRTTAAKAIGKIIEN
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Known secondary structure (DSSP)

T
SS
GGGGGGGG
SST
 .........80.........90.........100.........110.........120.........130.........140
Sequence APLYDPNNFFRLESLDVATIVKYGRPLLRGGPVDYNLAALDPQKRLAHLKKTLNGRLGLLGRVFEDEEXP
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Known secondary structure (DSSP) S









SSS

S

B






TS
TTTT
SSS


TTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence GAEWPFERLCEFLKVDLFDPQWETRHGAAXGLREVIRVHGAGAGRRRGKTRKENNDLNRQWLDDLAYRLL
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Known secondary structure (DSSP)

B
TTTT
S

TTTT
BSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence CVLXLDKFTDYSSDTSVAPIRETVGQTLGAVLRHISVESVHAIYRLLYCXVTQENXWAVCHGGXVGLRYV
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Known secondary structure (DSSP) B




S
SS
SSTTS
S



 .........290.........300.........310.........320.........330.........340.........350
Sequence VAVRKDLLLQDGDXIDGVVRCVXQGLGDIDDDVRSVSAATLIPXAKEFVXXRRSALDSLINIVWESLSNL
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Known secondary structure (DSSP)

T
SSGGG
STTTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GDDLSASTGKIXDLLATLCSFPEVLEAXKVSASQDEERSFTLLVPRLYPFLRHTITSVRLAVLKALXTFA
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Known secondary structure (DSSP)
SS

GGGTS
STTSGGGGGGGTT
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence NLGGETSQGWLNGRILRLIFQNIIVERDQDTLNXSLELWTTLVRRLAARDPAILADEFEAHAEPXXQLAL
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Known secondary structure (DSSP) TT
TTTSSSS
S



T
 .........500.........510.........520.........530.........540.........550.........560
Sequence HPIGVPRHPIPXNPALFQKPSGGTYSTHDVDGHXIQGEVDLVGVDVLIRSRISAAKAXGLIXSFIPTPRL
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Known secondary structure (DSSP)



BTTB




GGG
B
TTSSB




SSTT
TTTS
TTS
GGGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence ASYDTAVLQALSSPYASTQLAAAXVIDEYAKNCSTPEVASRFIEPLQKIIDLERPSHYRDLVTYVQRVRS
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Known secondary structure (DSSP) TT
S
SSSGGGGGGGS


S

GGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence ASQQLINLFRDHGKVSQGKLPTLAVVVQGEPEAGPGAFSIANAEKVVNEDFERLKRLXAPGQRLIALPQL
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Known secondary structure (DSSP) TS


TTTS



SSBTTSTT

TTSB
TTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence NEAREQTVEVIEEAKAAKEARDARIKAAAACALVAXKVLPKKPSPLIKAIXDSIKTEENQELQSRSAATI
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Known secondary structure (DSSP) TT


SS
S
S
 .........780.........790.........800.........810.........820.........830.........840
Sequence ARLVQLFTESGRRGPAEKVVANLVKFSCVEVAETPEFPIHAHKTNVILSXQKEEDRVPDAVKYAREAKAA
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Known secondary structure (DSSP) TSS
TT

TTTS

TT
BS

TT




 .........850.........860.........870.........880.........890.........900.........910
Sequence RITRRGAKEALEILSKNFGAELLERVPTLRTFXEEPLVRAFSGDLPPEARDPENAFGQEIVDAXSVIRTX
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Known secondary structure (DSSP) GGG
SSS

GGGG
SSST
 .........920.........930.........940.........950.........960.........970.........980
Sequence TPTLHPALHPFVXQQVPLVIKALRSDLSVFRYXAAKCXATICSVITVDGXTALVEKVLPSINNPLDLSFR
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Known secondary structure (DSSP) STTS
GGGT
SBSTTTGGGSS
SS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence QGAIEVIYHLIAVXGDAILPYVIFLIVPVLGRXSDSDNQIRLIATTSFATLVKLVPLEAGIPDPPGLSEE
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Known secondary structure (DSSP) GGGGGGGTT
SSS
SSS




TT

TT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence LLKGRDRERTFIAQLLDPKKIEPFKIPVAIKAELRSYQQEGVNWLAFLNKYHLHGILCDDXGLGKTLQTI
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Known secondary structure (DSSP) TTTS

TT
GGG






S






TT




TTS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence CIVASDHHQRAEEFARTGAPEVRKLPSLIICPPTLSGHWQQEIKTYAPFLTVTAYVGSPAERRAXKDSLD
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Known secondary structure (DSSP) T

GGGS



GGG
TTS


S
TTTTS

T
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence KTDIVITSYDVCRNDIDVIEKYNWNYCVLDQGHLIKNPKAKITLAVKRLTSNHRLILTGTPIQNNVLELW
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Known secondary structure (DSSP) TSSTTTS
TTGGGGG
TT
T


S



S
S
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence SLFDFLXPGFLGAEKVFLDRFAKPIANSRYSKASSKEQEAGALAIEALHKQVLPFLLRRLKEEVPKILQN
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Known secondary structure (DSSP) STTTT

TTSTT

GGG


SS



B

 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence YYCDLSDLQRKLFEDFTKREGKKITETAGRDDKEAKQHIFQALQYXRKLCNSPALVXKPGHKAYEDTQKY
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Known secondary structure (DSSP)


GGG




TT
TT
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence LAKHGTTLEDPIHAPKLGALRDLLVDCGIGVEDPLYTPIKPHRALIFCQXKEXLDXVQNTVLKQXLPSVS
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Known secondary structure (DSSP) TT

TT
GGG
TTTS



TTTS





S
T





TT

 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence YLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLTGADTVIFVEHDWNPQKDLQAXDRAHQK
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Known secondary structure (DSSP)
SSS
TTT
TT

TT




S

SS

SST


 .........1550.........1560.........1570.....
Sequence KVVNVYRIITRGTLEEKILSLQXDTDQILDLFNLG
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Known secondary structure (DSSP) S

TTSTT



GGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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