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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6g2jL_

Fold library idPDB HeaderMoleculeTitle
c6g2jL_3.30PDB header: oxidoreductaseChain: L: PDB Molecule: nadh-ubiquinone oxidoreductase chain 5;


Added to library: Sat Jun 9 08:58:07 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NIFTTSILLIFILLLSPILISMSNLIKHINFPLYTTTSIKFSFIISLLPLLMFFHNNMEYMITTWHWVTM
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Known secondary structure (DSSP)
TTTSSS
TTTS










 .........80.........90.........100.........110.........120.........130.........140
Sequence NSMELKMSFKTDFFSILFTSVALFVTWSIMQFSSWYMHSDPNINRFIKYLTLFLITMLILTSANNMFQLF
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Known secondary structure (DSSP) SS




SSSSSTTTTTTSS
S
S
SBSBSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMVWFSLNMNSWELQQIMFSNNNDNLI
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Known secondary structure (DSSP) S
SSS
TTSTTSBGGGTTS


 .........220.........230.........240.........250.........260.........270.........280
Sequence PLMGLLIAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFHPLTTNNNFILTTMLCLG
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Known secondary structure (DSSP) TT
STT
TTTSS





STTTT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALTTLFTAICALTQNDIKKIIAFSTSSQLGLMMVTLGMNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLA
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Known secondary structure (DSSP) T

BTT
GGGTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DEQDIRKMGNITKIMPFTSSCLVIGSLALTGMPFLTGFYSKDLIIEAINTCNTNAWALLITLIATSMTAM
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Known secondary structure (DSSP) S

BSTT



TTT
TTSSSSTTTSSSS
STTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence YSMRIIYFVTMTKPRFPPLISINENDPDLMNPIKRLAFGSIFAGFVISYNIPPTSIPVLTMPWFLKTTAL
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Known secondary structure (DSSP) TTSSS

S
S







TTS


S





TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence IISVLGFLIALELNNLTMKLSMNKANPYSSFSTLLGFFPSIIHRITPMKSLNLSLKTSLTLLDLIWLEKT
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Known secondary structure (DSSP) TTTTTSS





STTTTSSSSSSSSSTTTTTTTTT




 .........570.........580.........590.........600.....
Sequence IPKSTSTLHTNMTTLTTNQKGLIKLYFMSFLINIILIIILYSINL
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Known secondary structure (DSSP) TS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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