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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6g2dC_

Fold library idPDB HeaderMoleculeTitle
c6g2dC_5.40PDB header: ligaseChain: C: PDB Molecule: acetyl-coa carboxylase 1;


Added to library: Sat Jun 16 08:43:11 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VASPAEFVTRFGGNKVIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERAIRFVVMVTPEDLKANAEYIKM
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Known secondary structure (DSSP)


TT








S
TTSS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence ADHYVPVPGGPNNNNYANVELILDIAKRIPVQAVWAGWGHASENPKLPELLLKNGIAFMGPPSQAMWALG
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Known secondary structure (DSSP) SS


SSTTTTTT
TT
S

SSTTTT
TTT
SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence DKIASSIVAQTAGIPTLPWSGSGLRVDWQENDFSKRILNVPQELYEKGYVKDVDDGLQAAEEVGYPVMIK
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Known secondary structure (DSSP) STTTT



TT
SS



S


SS




TTSS

S
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ASEGGGGKGIRKVNNADDFPNLFRQVQAEVPGSPIFVMRLAKQSRHLEVQILADQYGNAISLFGRDCSVQ
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Known secondary structure (DSSP) TT

TTTT
STTTSTTS




S

SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RRHQKIIEEAPATIATPAVFEHMEQCAVKLAKMVGYVSAGTVEYLYSQDGSFYFLELNPRLQVEHPCTEM
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Known secondary structure (DSSP) TTS
TTS
T

S


TTS

S

TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VADVNLPAAQLQIAMGIPLYRIKDIRMMYGVSPWGDSPIDFEDSAHVPCPRGHVIAARITGTVQELNFRS
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Known secondary structure (DSSP) T

TT

GGG
TT

TT





TTTTSSS



S






SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence NKNVWGYFSVQFGHCFSWGENREEAISNMVVALKELSIRGDFRTTVEYLIKLLETESFQMNRIDTGWLDR
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Known secondary structure (DSSP)
TT


SSSSTT
STT


 .........500.........510.........520.........530.........540.........550.........560
Sequence LIAEKVQAERPDTMLGVVCGALHVADVSLRNSVSNFLHSLERGQVLPAHTLLNTVDVELIYEGVKYVLKV
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Known secondary structure (DSSP) TTTT






T



GGGG
S

SSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence TRQSPNSYVVIMNGSCVEVDVHRLSDGGLLLSYDGSSYTTYMKEEVDRYRITIGNKTCVFEKENDPSVMR
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Known secondary structure (DSSP)
SSS
SS


TTS

SS

SSTT


SSS


 .........640.........650.........660.........670.........680.........690.........700
Sequence SPSAGKLIQYIVEDGGHVFAGQCYAEIEVMKMVMTLTAVESGCIHYVKRPGAALDPGCVLAKMQLDNPSK
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Known secondary structure (DSSP)
SS
B


SS
TT

TT
TT

S

S
TT

B
TT


SS


 .........710.........720.........730.........740.........750.........760.........770
Sequence VQQAELHTGSLPRIQSTALRGEKLHRVFHYVLDNLVNVMNGYCLPDPFFSSKVKDWVERLMKTLRDPSLP
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Known secondary structure (DSSP)






SS



GGG

S

S
TTTTT



STT
TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence LLELQDIMTSVSGRIPPNVEKSIKKEMAQYASNITSVLCQFPSQQIANILDSHAATLNRKSEREVFFMNT
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Known secondary structure (DSSP) TSSS

STTSTT



T

SSSTTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence QSIVQLVQRYRSGIRGHMKAVVMDLLRQYLRVETQFQNGHYDKCVFALREENKSDMNTVLNYIFSHAQVT
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Known secondary structure (DSSP)
TT

SS
T
S

T
 .........920.........930.........940.........950.........960.........970.........980
Sequence KKNLLVTMLIDQLCGRDPTLTDELLNILTELTQLSKTTNAKVALRARQVLIASHLPSYELRHNQVESIFL
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Known secondary structure (DSSP) TTTSS




TTST

SSSTTS
SS

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence SAIDMYGHQFCIENLQKLILSETSIFDVLPNFFYHSNQVVRMAALEVYVRRAYIAYELNSVQHRQLKDNT
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Known secondary structure (DSSP) TT


T
SS

TTTTTSS
S
SS



SSS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence CVVEFQFMLPTSHCQRMGGMVSFRTFEDFVRIFDEVMGCFEPIHILNVAIKTDCDIEDDRLAAMFREFTQ
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Known secondary structure (DSSP)


SS





S
TTT










S
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence QNKATLVDHGIRRLTFLVAQFPKFFTFRARDKFEEDRIYRHLEPALAFQLELNRMRNFDLTAIPCANHKM
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Known secondary structure (DSSP)
TTT

S






SSSSS

STTTTS
GGGTTTTT
STT
SS


SSTTS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence HLYLGAAKVEVGTEVTDYRFFVRAIIRHSDLVTKEASFEYLQNEGERLLLEAMDELEVAFNNTNVRTDCN
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Known secondary structure (DSSP)



TTS





B






SSS






 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence HIFLNFVPTVIMDPSKIEESVRSMVMRYGSRLWKLRVLQAELKINIRAIPIRLFLTNESGYYLDISLYKE
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Known secondary structure (DSSP)
S




S
T



SSS

 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence VTDSRTAQIMFQAYGDKQGPLHGMLINTPYVTKDLLQSKRFQAQSLGTTYIYDIPEMFRQSLIKLWESMS
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Known secondary structure (DSSP)

SSS




SS



SSSS

S







SSTTTTS

GGG
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence TQAFLPSPPLPSDMLTYTELVLDDQGQLVHMNRLPGGNEIGMVAWKMTFKSPEYPEGRDIIVIGNDITYR
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Known secondary structure (DSSP) B







TTS



TT

SSS

SS
TT

TTSG
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence IGSFGPQEDLLFLRASELARAEGIPRIYVSANSGARIGLAEEIRHMFHVAWVDPEDPYKGYRYLYLTPQD
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Known secondary structure (DSSP) GG
B
T





B




TT
S
TT
GGG

 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence YKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLRGSGMIAGESSLAYNEIITISLVTCRAIGI
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Known secondary structure (DSSP) GGGTSTT

S
TTSSTS
SST
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence GAYLVRLGQRTIQVENSHLILTGAGALNKVLGREVYTSNNQLGGIQIMHNNGVTHCTVCDDFEGVFTVLH
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Known secondary structure (DSSP)
TT
SS
TTS




TSTS
SSS
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence WLSYMPKSVHSSVPLLNSKDPIDRIIEFVPTKTPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFSEIMQPW
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Known secondary structure (DSSP) TTS
SSTTS





BSS
SS







SS




TTTSSS

SS
TT

STTS
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence AQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKIIQQAGQVWFPDSAFKTYQAIKDFNREG
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Known secondary structure (DSSP) STTTT

S




SSSSS




SS
T
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence LPLMVFANWRGFSGGMKDMYDQVLKFGAYIVDGLRECCQPVLVYIPPQAELRGGSWVVIDSSINPRHMEM
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Known secondary structure (DSSP)








TTT

S

TT
TT
GGGSTTT
 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence YADRESRGSVLEPEGTVEIKFRRKDLVKTMRRVDPVYIHLAERLGTPELSTAERKELENKLKEREEFLIP
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Known secondary structure (DSSP) TT
SS
S

TSSS

 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence IYHQVAVQFADLHDTPGRMQEKGVISDILDWKTSRTFFYWRLRRLLLEDLVKKKIHNANPELTDGQIQAM
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Known secondary structure (DSSP) GGGSTTS
S

GGG
TTS
 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence LRRWFVEVEGTVKAYVWDNNKDLAEWLEKQLTEEDGVHSVIEENIKCISRDYVLKQIRSLVQANPEVAMD
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Known secondary structure (DSSP)
GGGGGGGG
STTSS
T
GGG
 .........2110.........2120.
Sequence SIIHMTQHISPTQRAEVIRIL
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Known secondary structure (DSSP) TSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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