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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6g20A_

Fold library idPDB HeaderMoleculeTitle
c6g20A_2.16PDB header: fluorescent proteinChain: A: PDB Molecule: bacteriophytochrome protein;


Added to library: Sat Dec 1 08:32:24 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DLTNCDREPIHIPGYIQPHGCLIACDNAMRMVLRHSENCGELLGLEGDLNGRTAEDVLGKRLVHDLRNAL
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Known secondary structure (DSSP)

S
GGG

TT

S
TTSTTS
BTTT

S

TTSB
 .........80.........90.........100.........110.........120.........130.........140
Sequence TTTRPAMLPAMETSDGRSFDISLHRYKSTTIIEFEPSGTARKMVDRIREADSVESLISRTTRLVKATLGY
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Known secondary structure (DSSP)





TT

TT

TTTT

S

 .........150.........160.........170.........180.........190.........200.........210
Sequence DRVLIYRFEEDGAGKVVSEAKQPELESFLGQYFPASDIPQQARALYLKNTLRIISDASGTPIPVLPAVDV
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Known secondary structure (DSSP) S
TTS

TTS


TT

GGGS
TTT

S
TTS

SSB
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence SGEPLDLSYAHLRNFSPIHCEYLRNMGVAASMSISVIVDDALWGLIVCHHCSPRVLSMPVRIAAAMFGEF
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Known secondary structure (DSSP) TS
B


TT
TTB


TT

TTSS




 .........290.........300.........310.........320.........330.........340.........350
Sequence FSMFLQVLKQKRRLDTINHAHAALDRFLRLAAHRANLEELLVDSFQDFARLIPCDGVGLWVGNNWHGHGA
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Known secondary structure (DSSP) TT
S
GGGGGGTS

STTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TPPHDAIPRLARFVASVSEGRVWATHALSQAIPEAEIYADTAAGMLAIPISQVKSDYLLFFRKEIVQNLE
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Known secondary structure (DSSP)


GGG
TTS
S

GGGGTTTTT
S

SSS



GGGG

 .........430.........440.........450.........460.........470.......
Sequence TGPMGDRLTPRKSFAIWKESVRLQAQPWSEADREIAETARIALVGVAFHHSELMAGL
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Known secondary structure (DSSP)

TT
TTSSTTT





T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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