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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fvbA_

Fold library idPDB HeaderMoleculeTitle
c6fvbA_3.30PDB header: nuclear proteinChain: A: PDB Molecule: importin beta-like protein kap120;


Added to library: Sat Sep 14 08:42:20 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LNELNLVQVLDVQKLAEQQLRQWETQAGFHYLLQSIYLNLSNSLQIRWLAVIQFKNGVDKYWRSTRINAI
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Known secondary structure (DSSP)

GGGGTTT










TSTT
TTS


SSSSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence PKDEKASIRGRLFEXIDEQNNQLCIQNAQASARIARLDFPVEWPTLFEDLENLLNDEIIRKDSVKIYNIL
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Known secondary structure (DSSP)
TTSGGGG


SSTTT
TTTTSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence XHINQIVKVLGTARIGRCRPAXQSKVPLILPLIVRIYLQSFEEWTTSSNSSLQVSYLALKVLRRIICEGY
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Known secondary structure (DSSP) TT

SSSGGGTSS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DRPQTDQSVCDFIKLSVSHFEXLISNHENFKKFDIYEKFIKCLGKLYFNLVTGSPANFILLPCSTQILIT
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Known secondary structure (DSSP) SSGGGSSSS


GGGT
TSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YTRLIFDKAPKVYRENSDVTGDFWEQTAIRGLLILKRVINFIHKKGRSDKLTIDASINKINTEFLNENLI
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Known secondary structure (DSSP) T

TTTS
SS



SSTTTTTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence TRLVDTLXEWYLRLRPTELENWFXDPEEWINEQXATSYEYQIRPCAENVFQDLXNTFSELLVPYLLKKIE
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Known secondary structure (DSSP) TSS


T

GGG
S



 .........430.........440.........450.........460.........470.........480.........490
Sequence NDASKLSNSLDDFLRKDAIYASFQLSASAVSEXVDFDRLLIQVFLPEATNTNISGDELRIIRRRVALIIN
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Known secondary structure (DSSP) TTSSS
SSSSGGGTSSSS

T

SS
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence EWSTVKCSEESKSLCYKLFTNFLTDEDDKVVLLTTVQTVRTXVDDWNFNKDTFQPFLTENVHLLLRKILP
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Known secondary structure (DSSP) TSS




SSTT

GGGGT
 .........570.........580.........590.........600.........610.........620.........630
Sequence SVSLTETRLYVLNTLSDIIIQTKPLISRDLLVEILQIIPNLWEIATNNASEAILANALLRLLRNLVSSLG
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Known secondary structure (DSSP)

S

S


SGGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence SQSHLTWDIAIPVVALACDPSSXQYQLLSEDGYELWGXLLQNFSSHDQEFDDKFVELVPFLKYGIETHTE
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Known secondary structure (DSSP) SSGGGGT
TTSTTT

TTTS


TTTTS
GG
 .........710.........720.........730.........740.........750.........760.........770
Sequence ILPTLLEIIKSYALILNPVDFFSNNTFQDIFKQXSKYLLKLREDSFQLVLEIWEILILSNESDYENLLLQ
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Known secondary structure (DSSP) GS

TTTTS
S
S

SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence KFYETGVLSALFDAIFLEEAPSSYLCSQIIQIIARISYVNPDALXTFLATYHDNLPTSNENARXPESIRK
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Known secondary structure (DSSP) TTTBSS


S
TS

S
TTT
B
 .........850.........860.........870.........880.........890.........900.........910
Sequence IVSKDQTYDSVVNKLLTGWIVCFRDIFDPKFKKVHILGISSLLRTGLVPILTEFSSIASLWIEXLEEINE
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Known secondary structure (DSSP) S

SSSSSTTTT


TT

T


 .........920.........930.........940.........950.........960.........970.........980
Sequence TNRGDCEKYHLNDIVTEQSIAFHPLTAEQLRYHQLCKNNDPVHNISLKDFISQSXEYLESHLGVERYQEF
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Known secondary structure (DSSP)
SSS

GGGSSS



TTGGGS




S
S
 .........990.........1000.
Sequence LKTINPSLLENLQXFLSIQPQ
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Known secondary structure (DSSP) S
T




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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