Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fv6A_

Fold library idPDB HeaderMoleculeTitle
c6fv6A_3.80PDB header: membrane proteinChain: A: PDB Molecule: aq128;


Added to library: Sat Mar 23 09:53:12 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IKKVVKLSIPIIVVNLLYTVENMISMILVSSISPSAVAATGFSLSLLWFIYSLMALSYSGTNILIAQFVG
Predicted secondary structure


SS confidence





































































Known secondary structure (DSSP)


STSSS
GGGTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AKKDPSPILINGLFLSFLISLPLFFYGKDFVLFLMKVETVRSLAKEYLTPIFWFIPIGFLTNTFYGAYNG
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) TT


TT



TTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AGDTKTPMKVAIIMNLTHIGTAYTLINLGVEGAGWGIAISEILAFFIYTFLLIFFLEPKLLFKMVRLGTP
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) S

S

TTTTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence TALERAITTLSFNVFVGFLAKFGDKVLAAHQIGLRIESISFMIGFGVMIASTTLAGQNYGARNYRGMVHA
Predicted secondary structure



SS confidence





































































Known secondary structure (DSSP) TTSTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VNTSAHFTALVMSLTGLILILFPHYLVYPFSPEVIEWASYYLQIVGISQPAMAYASIYSGALKGMGKTHI
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) SSGGG

TTTTTTTTTTTTT
T
 .........360.........370.........380.........390.........400......
Sequence PLFVNISSFWLFRIIPSYFLLKVISPLVPWGFMTFETAVRALFYYTVFKKVVGKLL
Predicted secondary structure



SS confidence























































Known secondary structure (DSSP) TTT

TTTTTTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D