Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fuvA_

Fold library idPDB HeaderMoleculeTitle
c6fuvA_2.00PDB header: transport proteinChain: A: PDB Molecule: solute binding protein, blmnbp1 in complex with


Added to library: Sat Mar 23 08:47:33 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NNKAGVTYPEIKLGETGKDLKATITFFNGRTDMGLASYPGKNWDAYIKEFNAMYPNITVKVQTDSNYADS
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)

SS


GGG

TTTTTTT

S
TGGGSTT
SS


TT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALTRLQANNDSWDIMMIPAVDRSEFSNYFVSYGKTEDMDKEIKLANEKAYDGQTYGVATDGQTSGVVYNA
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
SSS
S

S

GGGGGGTB


TTTBTTTTTTTT

SS
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence KVFKEAGINELPKTPEEFQAALKAIKEKTKAVPLYTNFAEEWAMGAWDQYIGGNATGDPKFMNQIMPHDK
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TT

S


S

S


TT
GGGGGTTS
TTTGGG
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TPFAKDDKAPDTHPYAVYKTLYDAVANGYTEEDYSTTDWESSKGKMNNGEIATMVLGAWAVPQMKQAGEH
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)
TTS

TTSTTSTT
B
S
GGG

TTS

BTTTTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ADDVQYMPFPITVDGKQYATLAGNYSMGINKNSDKDRQEAAMIFVKWMTEKSGYSKNEGGIPIVKNDDSY
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) GGG
S

BTTB
SSBTTS
TS
TT
B

BTT



 .........360.........370.........380.........390.........400.........410.........420
Sequence PDTYEHFKDVELIVDAPAKEGEEDLFADINSDSELGINNGNGKKIQDIVVDAANKTKTIDQIMGEWDQKW
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)
GGGTT
TT





TT
TTT

TTTT

TSS
 .......
Sequence GKAVESE
Predicted secondary structure

SS confidence






Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D