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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fqbD_

Fold library idPDB HeaderMoleculeTitle
c6fqbD_3.00PDB header: ligaseChain: D: PDB Molecule: mur ligase family protein;


Added to library: Sat Aug 25 08:56:07 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLAKNYEIVVVTGTNGKTLTTALTVGILKEVYGQVLTNPSNMITGIATNIAVLEIDEASLSRICDYIQPS
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Known secondary structure (DSSP)




S
SS
S





GGGGTT



TTT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LFVITNIFRDQEIYTTYNMILDAIRKVPTATVLLNGDSPLFYKPTIPNPIEYFGFDLEKGPAQLAHYNTE
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Known secondary structure (DSSP)







T
TT
TTSTTSSS
SSSS





S
B


TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence GILCPDCQGILKYEHNTYANLGAYICEGCGCKRPDLDYRLTKLVELTNNRSRFVIDGQEYGIQIGGLYNI
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Known secondary structure (DSSP)

B
TTT
SB

STT

TTT

B



S
SS
TTSS

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence YNALAAVAIARFLGADSQLIKQGFDKSRAVFGRQETFHIGDKECTLVLIKNPVGATQAIEMIKLAPYPFS
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Known secondary structure (DSSP) TT

GGGG



TT

STT
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LSVLLNANYADGIDTSWIWDADFEQITDMDIPEINAGGVRHSEIARRLRVTGYPAEKITETSNLEQVLKT
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Known secondary structure (DSSP)


STTT
S
GGGGGTS
GGGGGGS



STTTT

GGG
S
 .........360.........370.........380
Sequence IENQDCKHAYILATYTAMLEFRELLASRQI
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Known secondary structure (DSSP) T
SSS
T

SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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