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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fokB_

Fold library idPDB HeaderMoleculeTitle
c6fokB_1.97PDB header: membrane proteinChain: B: PDB Molecule: putative copper transport outer membrane porin oprc;


Added to library: Sat Mar 16 12:20:30 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PLTIVTNPKEPASDGADYLKTIPGFAVIRNGGSNGDPVLRGMFGSRLNILTNGGMMLGACPNRMDAPTSY
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Known secondary structure (DSSP)


TT


SSTTSTT

SSS

TTGGGTTB





TT
TT
GGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence ISPETYDKLTVIKGPQTVLWGPGASAGTILFEREPERFGELGSRVNASLLAGSNGRFDKVLDAAAGNRLG
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Known secondary structure (DSSP)

GGG
SSS


TT
S

SS





SSSTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YLRFTGNHAQSDDYEDGAGNTVPSRWKKWNGDVAVGWTPDEDTLIELTAGKGDGEARYAGRGMDGSQFKR
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Known secondary structure (DSSP)

BTTS
S


SSTT

TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ESLGLRFVKSNVSDVLEKVEAQVYYNYADHIMDNFRLRTPDPSSMMPMPMASQVDRRTLGGRLAATWRWD
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Known secondary structure (DSSP)

SSSSSSSS


TTSS

S

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence DFKLVTGVDAMRNEHRARGSKYDMMTDYYTDADQFPWSKDAVFHNYGAFGELTWFAAERDRLIGGLRLDR
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Known secondary structure (DSSP) T
TTTT
GGGS

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ASVKDYRQTLKMGHAMANPTANDTRADTLPSGFVRYEHDLADSPTTLYAGLGHAERFPDYWELFSPKRGP
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Known secondary structure (DSSP)

S





TTTT

SSSS


S
SB
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence NGSVNAFDKIKPEKTTQLDFGLQYNGDKLQAWASGYVGVVQDFILFSYREGMMGSSTQATNVDARIMGGE
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Known secondary structure (DSSP) TT
S
STTT



SSTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LGASYQLTGNWKTDASLAYAWGKNSSDDRALPQIPPLEARFGLTYEEGDWSAGSLWRVVAPQNRIARDQG
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Known secondary structure (DSSP)
SSSTTTT
SS



TT

B



BT
 .........570.........580.........590.........600.........610.........620.........630
Sequence NVVGKDFDKSAGFGVFSLNGAYRVTRNVKLSAGVDNLFDKDYTEHLNKAGDAGFGFSANETVPEPGRTFW
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Known secondary structure (DSSP)
SS
BB
S
B

TTSTT



B
TTS
B

SSSSS
SS
B
B
B
S
 .......
Sequence TKVDFSF
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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