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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fn6A_

Fold library idPDB HeaderMoleculeTitle
c6fn6A_2.70PDB header: transferaseChain: A: PDB Molecule: fatty acid synthase 1, isoform a;


Added to library: Sat Mar 16 09:21:34 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ETIVEVDLSKEDDAFLAGHTIDGRILFPATGYMTLAWQTFAKMQGSEFHKTPVVMENLVFHRATILNKNA
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Known secondary structure (DSSP)
TTSTTTGGGGGTT

TTS
GGG


S


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VVKFGINFFDGTGAFEICESGSLAVSGKITIPESIDNEELPLEEQTPSAVAKELGTNDVYKELRLRGYDY
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Known secondary structure (DSSP)
TTT
SSSS

S
TTTTS









SS

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GGIFRGIVRSDTVASTGKLQWVDNWISFMDTMLQFSILSKNLRELYLPTRIERAVINPAKHFELLSALTK
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Known secondary structure (DSSP)
GGG


TTSS


S
T
SS
S

TTS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence EEQVETGLPVQWYSDINVIKSAGVELRGLKANLAQRRPGTQAPPTLERYQFVPNINTTDLNENSEKARLH
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Known secondary structure (DSSP) TT
TTTTTT







S
S
SSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALDVAIQVIIENSSGAVKLKGVELANGRNPDVLVANRLLQIIEGEPVLTGDVAVVTSNNNEETITAALGD
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Known secondary structure (DSSP) TSSS
S
TTS
TTT

STT
SS


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence SGVRVVSKDVLKEPVEQNCHFVFGIDVLSRPDTKTLENSIASIRENGFLILEETLPTYTKTGRALLTKFG
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Known secondary structure (DSSP) T



TTTS
S
SSSTTTSSSSTTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence FVAVQEQSLGATRVLVLARKAVDLKTRKSVVVVATEQNFNWVDDLKAALATAATEEQYVYVVCQGEELFG
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Known secondary structure (DSSP)
SSS


TTTS



SS
TTT
S
TT

 .........500.........510.........520.........530.........540.........550.........560
Sequence AVGLMTCIKNENGGKLARLVFVQDAKAEKFSLTSTLYRQQLEKDLISNVLKNGAWGTFRHLKLETQQATL
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Known secondary structure (DSSP) TSTTGGGS
SSS



SSSTT

STT
S
SS

 .........570.........580.........590.........600.........610.........620.........630
Sequence QVEHAYVNALVKGDLASLKWIEAAQADDKNLETCTVYYAPINFRDVMLTSGKLAADALPGDLAEQDCVLG
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Known secondary structure (DSSP) SSSSTT
GGG





TT
TSS
STTSSTTTTT
S



 .........640.........650.........660.........670.........680.........690.........700
Sequence LEFAGRDTQGRRVMAMVPAKSLATTCVASKRMMWQIPEKWTMEEASTVPCVYSTVYYALVVRGQMKKGEK
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Known secondary structure (DSSP) S
TT


SS

SBSGGG

TT

TTSTTTS


TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence ILIHAGSGGVGQAAISVALAHGLTVFTTVGSKEKREFLLKRFPKLQERNIGNSRDTSFEQLVLRETKGRG
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Known secondary structure (DSSP) SSTTST
SSSTT

GGGSSSSTTTT

 .........780.........790.........800.........810.........820.........830.........840
Sequence VDLVLNSLSEEKLQASIRCLGLNGRFLEIGKFDLSNNSPLGMSVFLKNTSFHGILLDSVMEGEEEMQNQV
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Known secondary structure (DSSP)


TTT


T



GGGGGGS


S
 .........850.........860.........870.........880.........890.........900.........910
Sequence VSLVAEGIKTGAVVPLPTSVFNDQQVEQAFRFMASGKHIGKVVIKVRDEEAGKKALQPKPRLINAIPRTY
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Known secondary structure (DSSP) T





TT
T


SSS


TTS








B



 .........920.........930.........940.........950.........960.........970.........980
Sequence MHPEKSYILVGGLGGFGLELTNWLVTRGARYIVLTSRSGVKTGYQGLMIRRWQERGVKVVIDTSDVTTAA
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Known secondary structure (DSSP)

TTSTTTSTT


SS


STT

S

SS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence GAKKLLENSNKLALVGGIFNLAAVLDPKVTATKYLDQFSRDICTELDYFICFSSVSQTNYGLANSAMERI
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Known secondary structure (DSSP) S

S



TT





 .........1060.........1070.........1080.........1090...
Sequence CEQRQVSGFPGTAIQWHPVVASMLEVLFQGPHPAFLYKVVSHH
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Known secondary structure (DSSP) TT




SS



S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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