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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fmlJ_

Fold library idPDB HeaderMoleculeTitle
c6fmlJ_4.34PDB header: dna binding proteinChain: J: PDB Molecule: actin related protein 5;


Added to library: Sat Apr 28 08:26:56 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RDEPWKRLPPPTVYPVKEARFEKYIPPQLDGRERALAQPPGQVAIVIDNGSHSVRAGWNFEDKPRLAIPP
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Known secondary structure (DSSP)

GGGTS





B







S





TTTTS
TTS



SS
TTSSS
S
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence IMSKYRDRKMGKTFSFAGSDCYAARSHIRNAFEAGTGIVSNWDVMEHVLDYVFVKLGMNEDMPIVMTEAV
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Known secondary structure (DSSP) TTTTGGGS






SB
TTS

B









T
 .........150.........160.........170.........180.........190.........200.........210
Sequence ANLPYSRKSMSEIIFECYGAPSLVYGIDSLFSFRHNQGQTGLVVSSSYSATHVIPVYNRKALLSQAIRLN
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Known secondary structure (DSSP) T

TT

STT
SS
SS
SSS
B
TTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence WGGWHMAEYMLKLLKLKYYTGFPGKLNSSQTEHMVRDFCYVSLDYDRELAGYLDWTGLEDRERIVQYPXX
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Known secondary structure (DSSP)

S
S

SS






SSTTT
STT




 .........290.........300.........310.........320.........330.........340.........350
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWSKSLLHAFRYGP
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Known secondary structure (DSSP)





TTT
T
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence RPFDPSSQAETHRVHLNVERIRVPEVLFQPAAIAGVDQAGLVEIAGDILCQRLPSLPGIQDAPDAFLRDV
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Known secondary structure (DSSP) S



S
S
STGGGTTT
T


S

TSTT
TT
S
STS
 .........430.........440.........450.........460.........470.........480.........490
Sequence FLTGGNTLFQNFDERLRQGLMALLPVGAPLRVRRAQDAILDAWRGAAGWACTEEAKAAWITREEYLEKGG
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Known secondary structure (DSSP)
SSTT

TTSS
TT




SSTTTTTSTT

S
 .........500...
Sequence EYIKEHDLGNAFA
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Known secondary structure (DSSP) S




SSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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