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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fkhA_

Fold library idPDB HeaderMoleculeTitle
c6fkhA_4.20PDB header: membrane proteinChain: A: PDB Molecule: atp synthase subunit alpha, chloroplastic;


Added to library: Sat May 26 08:34:27 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TIRADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNV
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Known secondary structure (DSSP)


TT









SS
TT

TT

SSS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEITASESRLIESPAPGIMSRRS
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Known secondary structure (DSSP) SS

SS

TT




S
GGGTT

TTS
BSSSS





SS




STTB

 .........150.........160.........170.........180.........190.........200.........210
Sequence VYEPLQTGLIAIDAMIPVGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTN
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Known secondary structure (DSSP)

SB


S
S

BTT
B

TTSSTTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPP
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Known secondary structure (DSSP) TGGGSTTS
TTT

STT

B
 .........290.........300.........310.........320.........330.........340.........350
Sequence GREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNA
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Known secondary structure (DSSP)
GGG
BTTTT

BB
TTTTT


GGG
TTSSS
B
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence GIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLK
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Known secondary structure (DSSP) T
SS
B
TTT


SSGGGGS
TTTTTTS
SS

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence QPQSAPLTVEEQVMTIYTGTNGYLDSLELDQVRKYLVELRTYVKTNKPEFQEIISSTKTFTEEAEALLKE
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Known secondary structure (DSSP)

TT



TTTTSSS
T
T
S

 .........500..
Sequence AIQEQMERFLLQ
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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