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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fjyB_

Fold library idPDB HeaderMoleculeTitle
c6fjyB_2.31PDB header: cell adhesionChain: B: PDB Molecule: protein csue;


Added to library: Sat May 19 08:28:29 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ACSVSASGTSSISVPSIYLMENGENSSQFNSGLSCTGFSLALANMTYLYRVEQMSNSFTNAQTGELNAII
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Known secondary structure (DSSP)

SS


SB

S

S
BB



SB
TTT


B
 .........80.........90.........100.........110.........120.........130.........140
Sequence LDSNNEIISLGQEKDMSSFTLVNLFSGPDGNLPFYIRLPAGQSVSPGVYQADSPLKVKWFYSVPAVAIVG
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Known secondary structure (DSSP)
SSS
B

TT





BSSGGGG
BTTTT
S




SSS


B
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence IGVFFESPGFRRGGIGFNWGSGADSLGSLSITVLPDCRILAQDVNFGTAAFLEPVQSSMGIRCSVNTPYY
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Known secondary structure (DSSP) SS

TT
B





B

S
















TT


 .........220.........230.........240.........250.........260.........270.........280
Sequence VSLNNGLSPQNGNQRAMKSTFLKYDIFKNSSNDRWGSRWSSLNATINPVTQQNYVFTTKIVDTIPAGTYQ
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Known secondary structure (DSSP)


S

SSSS



TTSS
B



TTSSSB










B
 .........
Sequence DTVTVQVEF
Predicted secondary structure
SS confidence








Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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