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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fikA_

Fold library idPDB HeaderMoleculeTitle
c6fikA_7.10PDB header: biosynthetic proteinChain: A: PDB Molecule: polyketide synthase;


Added to library: Sat Mar 24 09:59:32 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AQMRVVAFGDQTYDCSEAVSQLLRVRDDAIVVDFLERAPAVLKAELARLSSEQQEETPRFATLAELVPRY
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Known secondary structure (DSSP)


TTS

TT

SSTTS
TS



SSSST
 .........80.........90.........100.........110.........120.........130.........140
Sequence RAGTLNPAVSQALTCIAQLGLFIRQHSSGQEAYPTAHDSCITGVATGALTAVAVGSASSVTALVPLALHT
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Known secondary structure (DSSP) TT


TTS





TTTSTT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VAVAVRLGARAWEIGSCLADARRGANGRYASWTSAVGGISPQDLQDRISAYTAEQALASVSVPYLSAAVG
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Known secondary structure (DSSP)



TT
TT



SSS
T

TTTS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence PGQSSVSAAPVILDAFLSTLLRPLTTTRLPITAPYHAPHLFTAKDVQHVTDCLPPSEAWPTVRIPIISFS
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Known secondary structure (DSSP) SS



TTS



S

S
TTT

GGGS


S


B

S

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RDEAVSRGASFPAAMSEAVRDCLIRPIALDRMAVSIANHARDLGKDSVLPSPIALSFSDKLGPQVNSHLP
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Known secondary structure (DSSP) SSSS


BTS
B
GGGTT
SS
TT
TTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GSKSIPSAIGAEQQPMAKSPIAILAASGRFPQSSSMDQFWDVLINGVDTHELVPPTRWNAATHVSEDPKA
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Known secondary structure (DSSP)







TTTSS

STT

BTTBSSTT





TTT

B
SS

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence KNVSGTGFGCWLHEAGEFDAAYFNMSPREAPQVDPAQRLALLTATEALEQAGVVPNRTSSTQKNRVGVWY
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Known secondary structure (DSSP) TT
BS



TTTT
TTTTT

TTS
TT

SSSSGGG
STT
 .........500.........510.........520.........530.........540.........550.........560
Sequence GATSNDWMETNSAQNVDTYFIPGGNRAFIPGRVNYFHKFSGPSYTIDTACSSSLAALHMACNALWRGEVD
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Known secondary structure (DSSP) S







GGGS

TT
TTT

S


GGGTTTS
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence TAIVGGTNVLTNPDMTAGLDAGHFLSRSGNCKTFDDEADGYCRGEAVVTLILKRLPDAQADKDPIQASIL
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Known secondary structure (DSSP)




TT
B
SSSS

TTBSS
B
B


T


S
 .........640.........650.........660.........670.........680.........690.........700
Sequence GIATNHSAEAASITRPHAGAQQDLFQQVLTETGLTANDISVCEMHGTGTQAGDSGETTSVVETLAPLNRS
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Known secondary structure (DSSP)

S
SSSS


T

GGG



SBS
B
SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence GSAVRTTPLYIGAVKSNVGHAESAAGVSSLAKILLMLKHSKIPPHVGIKTKLNHRLPDLAARNTHIARSE
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Known secondary structure (DSSP) S
BS
SS

T
B
GGGT





SS
B
TTS

TTTTT

SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence VPWPRPKNGKRRVLLNNFSAAGGNTCLVLEDAPEPEDSQEVDPREHHIVALSAKTPDSMVNNLTNMITWI
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Known secondary structure (DSSP)



TT



TT




SS




S

SSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence DKHSGDSLATLPQLSYTTTARRVHHRHRAVATGTDLLQIRSSLQEQLDRRVSGERSIPHPPNGPSFVLAF
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Known secondary structure (DSSP) TTS
STSS


SSSSS

SS
S

SS

 .........920.........930.........940.........950.........960.........970.........980
Sequence TGQGSAFAGMGVDLYKRFASFRSDIARYDQICEGMSLPSIKAMFEDEKVFSTASPTLQQLTHVCFQMALY
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Known secondary structure (DSSP)

GGG

TTTT
TT




SGGGTT

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence RLWKSLGVQAKAVVGHALGEYAALYAAGVLSQSDTLYLVGRRAQLMEKHLSQGTHAMLAVRAKEEAIVAA
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Known secondary structure (DSSP) TT


TTTSS


SSSS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence IDGPPGEAYEFSCRNGEQRNVLGGTVAQIQAAKAALEAKKIRCQYLDTPMAFHTGQVDPILPELLQVAAA
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Known secondary structure (DSSP) SSS
BTTTB
SSSTT


S
SS

SSGGGSTTS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence CSIQDPQIPVISPAYGKVIRSAKDFQPEYFTHHCRSSVNMVDALQSAVEEGLLDKNVIGLEIGPGPVVTQ
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Known secondary structure (DSSP) S




SS
TTTT
SGGGSSTS
TTS

TTSSBSSS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence FVKEAVGTTMQTFASINKDKDTWQLMTQALAKFYLAGASVEWSRYHEDFPGAQKVLELPAYGWALKNYWL
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Known secondary structure (DSSP)
TT


SB
SSS
TT






TTT















 .........1270.....
Sequence QYVNDWSLRKGDPAV
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Known secondary structure (DSSP)


TTGGGGTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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