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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ffyA_

Fold library idPDB HeaderMoleculeTitle
c6ffyA_3.90PDB header: apoptosisChain: A: PDB Molecule: vps10 domain-containing receptor sorcs2;


Added to library: Sat Aug 4 08:56:29 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVSLISTSFVLKGDATHNQAMVHWTGENSSVILILTKYYHADMGKVLESSLWRSSDFGTTYTKLTLQPGV
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Known secondary structure (DSSP)






S


S
SSS




TTTT


SSTTS


SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TTVIDNFYICPAKIILVSSSLGDREQSLFLSTDEGATFQKYPVPFLVETLLFHPKEEDKVLAYTKDSKLY
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Known secondary structure (DSSP)

B
S








SS
SSSSSS

SS

S
SS
SS
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VSSDLGKKWTLLQERVTKDHVFWAVSGVDDDPNLVHVEAQDLSGGYRYYTCLIYNCHIAPFSGPIDRGSL
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Known secondary structure (DSSP) SSTTSS
SS

SSSSS



TTT
SS




S



BSS

B
 .........220.........230.........240.........250.........260.........270.........280
Sequence TVQDEYIFLKATSTNRTKYYVSYRRSDFVLMKLPKYALPKDLQIISTDEQQVFVAVQEWNQVDTYNLYQS
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Known secondary structure (DSSP)

SSS

SSS
SS



B

SSS

S

TTS

S

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DLRGVRYSLVLENVRSSRQAEENVVIDILEVRGVKGVFLANQKVDGKVTTVITYNKGRDWDYLRPPSTDM
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Known secondary structure (DSSP)
SSS
B

SSSS


TTSTTTTSSTTSS
B




ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence NGKPTNCQPPDCYLHLHLRWADNPYVSGTVHTKDTAPGLIMGAGNLGSQLVEYKEEMYITSDCGHTWRQV
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Known secondary structure (DSSP) T

TTS

TTT


S



SS

S




STT
SS

SS

SSTTSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence FEEEHHVLYLDHGGVIAAIKDTSIPLKILKFSVDEGHTWSTHNFTSTSVFVDGLLSEPGDETLVMTVFGH
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Known secondary structure (DSSP) S
TTTT
SSS
B


SSTTSS




SS
B



TTSSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence ISFRSDWELVKVDFRPSFPRQCGEDDYSSWDLTDLQGDHCIMGQQRSYRKRKSTSWCVKGRSFTSALTSR
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Known secondary structure (DSSP) BSSS


TTT

SB

TTS


TT


TT
TT


B

SS




 .........570.........580.........590.........600.........610.........620.........630
Sequence VCKCRDSDFLCDYGFERSSSSESTANKCSANFWFNPLSPPEDCVLGQTYTSSLGYRKVVSNVCEGGVDLQ
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Known secondary structure (DSSP)
B

GGG
TT
S
TTSS



SS

TTS

TT

TT




S
TT


B
SSSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence QSPVQLQCPLQAPRGLQVSIRGEAVAVRPREDVLFVVRQEQGDVLTTKYQVDLGDGFKAMYVNLTLTGEP
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SS


S

SS


SS


SS

SSS


S
 .........710.........720.........730.........740.........750.........760.........770
Sequence IRHHYESPGIYRVSVRAENMAGHDEAVLFVQVNSPLQALYLEVVPVIGVNQEVNLTAVLLNPNLTVFYWW
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Known secondary structure (DSSP)


SS
SS








STT




S


 .........780.........790.........800.........810.........820.........830.........840
Sequence IGHSLQPLLSLDNSVTTKFTDAGDVRVTVQAACGNSVLQDSRLVRVLDQFQVVPLRFSRELDTFNPNTPE
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Known secondary structure (DSSP)
SS
S

SSS

SS

SSS

SS
GGGGGG



 .........850.........860.........870.........880.........890.........900.........910
Sequence WREDVGLVVTRLLSKETSIPEELLVTVVKPGLPTIADLYVLLPLTSDKRLAAVQQALNSHRISFILRGGL
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Known secondary structure (DSSP)


STT

SSSS




TTS
TT
 ........
Sequence RILVELRD
Predicted secondary structure

SS confidence







Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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