Fold library entry viewer: c6ff4u_

Added to library: Sat Sep 1 08:46:10 2018
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	L	S	D	E	E	L	D	A	M	F	P	E	G	Y	K	V	L	T	G	F	H	M	Q	T	E	D	R	T	M	K	S	V	N	D	Q	P	S	G	N	L	P	F	L	K	P	D	D	I	Q	Y	F	D	K	L	L	V	D	V	D	E	S	T	L	S	P	E	E	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S		S	S															S						S	S		S	S	S	S					T	T	S	T	T	T	T	G	G	G	S	S				S	S	S	S		S	S	T	T	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	R	K	I	M	K	L	L	L	K	I	K	N	G	T	P	P	M	R	K	A	A	L	R	Q	I	T	D	K	A	R	E	F	G	A	G	P	L	F	N	Q	I	L	P	L	L	M	S	P	T	L	E	D	Q	E	R	H	L	L	V	K	V	I	D	R	I	L	Y	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G												S															T																		T		S	S																T	T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	D	L	V	R	P	Y	V	H	K	I	L	V	V	I	E	P	L	L	I	D	E	D	Y	Y	A	R	V	E	G	R	E	I	I	S	N	L	A	K	A	A	G	L	A	T	M	I	S	T	M	R	P	D	I	D	N	M	D	E	Y	V	R	N	T	T	A	R	A	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T		S	S	S									G	G	G	T	S		S	S																			T	T								S	T	T	T	S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	V	A	S	A	L	G	I	P	S	L	L	P	F	L	K	A	V	C	K	S	K	K	S	W	Q	A	R	H	T	G	I	K	I	V	Q	Q	I	A	I	L	M	G	C	A	I	L	P	H	L	R	S	L	V	E	I	I	E	H	G	L	V	D	E	Q	Q	K	V	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S			S																			S		G	G	G	G	G	G									T	T	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	S	A	L	A	I	A	A	L	A	E	A	A	T	P	Y	G	I	E	S	F	D	S	V	L	K	P	L	W	K	G	I	R	Q	H	R	G	K	G	L	A	A	F	L	K	A	I	G	Y	L	I	P	L	M	D	A	E	Y	A	N	Y	Y	T	R	E	V	M	L	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S		G	G	G	S	T	T	T													S														G	G	G	S											T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	R	E	F	Q	S	P	D	E	E	M	K	K	I	V	L	K	V	V	K	Q	C	C	G	T	D	G	V	E	A	N	Y	I	K	T	E	I	L	P	P	F	F	K	H	F	W	Q	H	R	M	A	L	D	R	R	N	Y	R	Q	L	V	D	T	T	V	E	L	A	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T																		S	S	S	S		S									T								T	S	S	S					S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	G	A	A	E	I	I	S	R	I	V	D	D	L	K	D	E	A	E	Q	Y	R	K	M	V	M	E	T	I	E	K	I	M	G	N	L	G	A	A	D	I	D	H	K	L	E	E	Q	L	I	D	G	I	L	Y	A	F	Q	E	Q	T	T	E	D	S	V	M	L	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										G	G	G	T	T		S																			T		S	T	T			T	T	T														T			S			S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	G	T	V	V	N	A	L	G	K	R	V	K	P	Y	L	P	Q	I	C	G	T	V	L	W	R	L	N	N	K	S	A	K	V	R	Q	Q	A	A	D	L	I	S	R	T	A	V	V	M	K	T	C	Q	E	E	K	L	M	G	H	L	G	V	V	L	Y	E	Y	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T	G	G	G												T	T	G	G	G		S	T	T											T					T	T	T															S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	E	Y	P	E	V	L	G	S	I	L	G	A	L	K	A	I	V	N	V	I	G	M	H	K	M	T	P	P	I	K	D	L	L	P	R	L	T	P	I	L	K	N	R	H	E	K	V	Q	E	N	C	I	D	L	V	G	R	I	A	D	R	G	A	E	Y	V	S	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																			S		S	T	T		S	S		G	G	G	T								T	T																						T	T	S	S		S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	W	M	R	I	C	F	E	L	L	E	L	L	K	A	H	K	K	A	I	R	R	A	T	V	N	T	F	G	Y	I	A	K	A	I	G	P	H	D	V	L	A	T	L	L	N	N	L	K	V	Q	E	R	Q	N	R	V	C	T	T	V	A	I	A	I	V	A	E	T	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	T	T	S	S	S		T	T	S																			T	T	T								T	T		S	S		T	T	T	S														S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	P	F	T	V	L	P	A	L	M	N	E	Y	R	V	P	E	L	N	V	Q	N	G	V	L	K	S	L	S	F	L	F	E	Y	I	G	E	M	G	K	D	Y	I	Y	A	V	T	P	L	L	E	D	A	L	M	D	R	D	L	V	H	R	Q	T	A	S	A	V	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S							G	G	G	S																					G	G	G	G	G	T	T													T	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	H	M	S	L	G	V	Y	G	F	G	C	E	D	S	L	N	H	L	L	N	Y	V	W	P	N	V	F	E	T	S	P	H	V	I	Q	A	V	M	G	A	L	E	G	L	R	V	A	I	G	P	C	R	M	L	Q	Y	C	L	Q	G	L	F	H	P	A	R	K	V	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	T	T	S	S													G	G	G	G	G			S																												T	T	S	S	S		S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.
Sequence	V	Y	W	K	I	Y	N	S	I	Y	I	G	S	Q	D	A	L	I	A	H	Y	P	R	I	Y	N	D	D	K	N	T	Y	I	R	Y	E	L	D	Y	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S	T	T	T	T	T								S	S

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PDB structure

FASTA sequence

Hidden Markov model

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