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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ff4C_

Fold library idPDB HeaderMoleculeTitle
c6ff4C_16.00PDB header: splicingChain: C: PDB Molecule: snw domain-containing protein 1;


Added to library: Sat Sep 1 08:29:36 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEITEKTRVALE
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Known secondary structure (DSSP)

S



B
SSSSB

TT
SS
SGGGGSGGGSS




SS
S


 .........80.........90.........100.........110.........120.........130.........140
Sequence KSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGP
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Known secondary structure (DSSP) S

S











TTT
SSTTTT
SS







SS



S









 .........150.........160.........170.........180.........190.........200.........210
Sequence PSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALY
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Known secondary structure (DSSP)
S






S





SST






SS

SS




SS
SS
SSSS


TTSS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence IADRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQKARERVQYDQRLFNQSKGMDSGFAGGEDEIYNV
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Known secondary structure (DSSP)

SSSSS





TTTTTS



S
SS
TT
TTS


 ......
Sequence YDQAWR
Predicted secondary structure


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Known secondary structure (DSSP)
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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