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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fayA_

Fold library idPDB HeaderMoleculeTitle
c6fayA_3.80PDB header: cell adhesionChain: A: PDB Molecule: odz3 protein;


Added to library: Sat Mar 31 09:00:03 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSGFVRPSPIIVSSPLSTFFRSSPEDSPIIPETQVLHEETTIPGTDLKLSYLSSRAAGYKSVLKITMTQA
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S



SSTTS

TTTT
TTSS
GGGSTT




SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VIPFNLMKVHLMVAVVGRLFQKWFPASPNLAYTFIWDKTDAYNQKVYGLSEAVVSVGYEYESCLDLTLWE
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Known secondary structure (DSSP)


TT
SS


TT


STTT
BSSSSSS
B

 .........150.........160.........170.........180.........190.........200.........210
Sequence KRTAVLQGYELDASNMGGWTLDKHHVLDVQNGILYKGNGENQFISQQPPVVSSIMGNGRRRSISCPSCNG
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Known secondary structure (DSSP)
B


SS
BTTBSS
TTTTSSS
STTS




S

S
B

SS
SS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QADGNKLLAPVALACGIDGSLYVGDFNYVRRIFPSGNVTSVLELPAHRYYLATDPVTGDLYVSDTNTRRI
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Known secondary structure (DSSP) B
SS

BS
B





TT

TT
SSSBB





S


SSS

TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YRPKSLTGAKDLTKNAEVVAGTGEQCLPFDEARCGDGGKAVEATLMSPKGMAIDKNGLIYFVDGTMIRKV
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Known secondary structure (DSSP)

S
SS

S
SSS




BBTT



SS
SS
SS
SS
TTT
B
SS
SSS
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DQNGIISTLLGSNDLTSARPLTCDTSMHISQVRLEWPTDLAINPMDNSIYVLDNNVVLQITENRQVRIAA
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Known secondary structure (DSSP)
SSS

SS
S

GGG




SSS


TT










TTTT

SS

TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence GRPMHCHAVQTTLESATAIAVSYSGVLYITETDEKKINRIRQVTTDGEISLVAGIPSECDCKNDANCDCY
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Known secondary structure (DSSP)


TT

TTTS



B



B
TT


SSS

SSS




SS
SSS
TTS


 .........500.........510.........520.........530.........540.........550.........560
Sequence QSGDGYAKDAKLNAPSSLAASPDGTLYIADLGNIRIRAVSKNKPLLNSMNFYEVASPTDQELYIFDINGT
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Known secondary structure (DSSP) B
TTSBTTT
B
S

TT

TTTT






TTS


TTTT
SS
B
 .........570.........580.........590.........600.........610.........620.........630
Sequence HQYTVSLVTGDYLYNFSYSNDNDVTAVTDSNGNTLRIRRDPNRMPVRVVSPDNQVIWLTIGTNGCLKSMT
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Known secondary structure (DSSP) TTT



TT




TT




TTS

TTS




TTS


 .........640.........650.........660.........670.........680.........690.........700
Sequence AQGLELVLFTYHGNSGLLATKSDETGWTTFFDYDSEGRLTNVTFPTGVVTNLHGDMDKAITVDIESSSRE
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Known secondary structure (DSSP)
SSSSTTS


SSS


TT


TTSSSTTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence EDVSITSNLSSIDSFYTMVQDQLRNSYQIGYDGSLRIFYASGLDSHYQTEPHVLAGTANPTVAKRNMTLP
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Known secondary structure (DSSP)



SSB
TTBSS


SSS


TTT


S
 .........780.........790.........800.........810.........820.........830.........840
Sequence GENGQNLVEWRFRKEQAQGKVNVFGRKLRVNGRNLLSVDFDRTTKTEKIYDDHRKFLLRIAYDTSGHPTL
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Known secondary structure (DSSP) SSS
TTTT
SSS


TTS


TTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence WLPSSKLMAVNVTYSSTGQIASIQRGTTSEKVDYDSQGRIVSRVFADGKTWSYTYLEKSMVLLLHSQRQY
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Known secondary structure (DSSP)
SS




TTSSTT


TT



SSS
TT
TT

 .........920.........930.........940.........950.........960.........970.........980
Sequence IFEYDMWDRLSAITMPSVARHTMQTIRSIGYYRNIYNPPESNASIITDYNEEGLLLQTAFLGTSRRVLFK
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Known secondary structure (DSSP)
TT


SSS

SSS
TT




SS

TTTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence YRRQTRLSEILYDSTRVSFTYDETAGVLKTVNLQSDGFICTIRYRQIGPLIDRQIFRFSEDGMVNARFDY
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Known secondary structure (DSSP) TTTTT
SSS
SSSS
TT
SSS



 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence SYDNSFRVTSMQGVINETPLPIDLYQFDDISGKVEQFGKFGVIYYDINQIISTAVMTYTKHFDAHGRIKE
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Known secondary structure (DSSP)
B
SSS
B


SS
B






TTTT
TTTT
SS

SSSS

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence IQYEIFRSLMYWITIQYDNMGRVTKREIKIGPFANTTKYAYEYDVDGQLQTVYLNEKIMWRYNYDLNGNL
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Known secondary structure (DSSP) TT
TTS
SSSS



TTSS
SSS
TTS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence HLLNPSSSARLTPLRYDLRDRITRLGDVQYRLDEDGFLRQRGTEIFEYSSKGLLTRVYSKGSGWTVIYRY
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Known secondary structure (DSSP)

SS




TT

TT
TTS
TT
TTS
SSS


 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence DGLGRRVSSKTSLGQHLQFFYADLTYPTRITHVYNHSSSEITSLYYDLQGHLFAMEISSGDEFYIASDNT
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Known secondary structure (DSSP)
TTS
SSS



SSSTTS

TTTT
SSS
TTT
TT
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence GTPLAVFSSNGLMLKQIQYTAYGEIYFDSNVDFQLVIGFHGGLYDPLTKLIHFGERDYDILAGRWTTPDI
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Known secondary structure (DSSP) S

TT


TT

S
SSS

SB
GGGS
TTT

SSSTTTSSBSS

S
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence EIWKRIGKDPAPFNLYMFRNNNPASKIDVNSWLVTFGFHLHNAIPGFPVPKFDLTEPSYELVKSQQWEDV
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Known secondary structure (DSSP) TS

S

TT
SGGG
TT







TTTTT

TTTTSTT






S





S

 .........1480.........1490.........1500.........1510........
Sequence PPIFGVQQQVARQAKAFLSLGKGAEQSWLWFATVKSLIGKGVMLAVSQ
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Known secondary structure (DSSP) S

STT







SS

B




SS
TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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