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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fasA_

Fold library idPDB HeaderMoleculeTitle
c6fasA_1.90PDB header: dna binding proteinChain: A: PDB Molecule: b3 domain-containing transcription repressor val1;


Added to library: Sat Apr 21 08:25:42 2018
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MNLNIVPLFEKTLSASDAGRIGRLVLPKAAEAYFPPISQSEGIPLKIQDVRGREWTFQFRYWPNNNSRMY
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Known secondary structure (DSSP)




STT




TTTS



STT
TT

TT
 .........80.........90.........100.........
Sequence VLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAA
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Known secondary structure (DSSP)

TT

TT
TTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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