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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6faoA_

Fold library idPDB HeaderMoleculeTitle
c6faoA_1.88PDB header: hydrolaseChain: A: PDB Molecule: glycoside hydrolase family 6;


Added to library: Sat Jun 9 08:32:17 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DSAFYVDPDTGAARWVAANPGDPRAAVIRDRIASVPQGRWFTQNNPGTVRGQVDAFVGAAAAAGKIPILV
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Known secondary structure (DSSP)

SB


TTS
TTSTTTTTS
B

S

TTTTT
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence VYNIPNRDCSGAGGMPNHTAYRQWIDEVAAGLAGRPAAIILEPDVLALMTSCMNESQQAETRASMAYAGK
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Known secondary structure (DSSP)


TTTTS





SSTTTT

STTGGGT

 .........150.........160.........170.........180.........190.........200.........210
Sequence RLKAGSSQAKVYFDAGHSAWLAPSEMAARLVAADIANSADGISVNVSNYRTTAESVNYAKAVVAATGAPH
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Known secondary structure (DSSP)
TT


TTSS
TT
SSTT



T
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LKIVVDTSRNGNGPAPDSEWCDPPGRAIGTPSTTDTGDPAVDAFLWIKLPGEADGCIAPAGQFVPQRAYE
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Known secondary structure (DSSP)

SS
TT
S
TT


SS
SS



S
SBS

S
TTB
S
TTB

SSSSSTT
B
 ......
Sequence LAIAAA
Predicted secondary structure

SS confidence





Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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