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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6f73B_

Fold library idPDB HeaderMoleculeTitle
c6f73B_2.22PDB header: flavoproteinChain: B: PDB Molecule: mtvao615;


Added to library: Sat Jan 13 08:28:58 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SCRVLPGDAAWPSSRDWAKLNKTLNGHLIATVPQASVCHKSPFGQYDAQACEELKSSWDISTITHVNAPG
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Known secondary structure (DSSP)
B


TTSTTS

TTT



GGGGG

TTT



TTTB

TSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DVLSQNFQNYSCVPFTDPSQPCQLGNYPSYVVNVTGAADVQAALKFAQKHNVRIVIKNTGHDYLGKSTGK
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Known secondary structure (DSSP)

S
TTSS
TTS
TTS



TTS
S

ST

SSS

TTSTT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GALSLWMHNLKSTKFIKNYKAPYYKGPAAKLGAGVEGFEAYAMANSTGHRIVGGTCPTVGIVGGYTQGGG
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Known secondary structure (DSSP) T

TT


TTTT
BTT



SSTTSBTTTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence HSILSSSYGVAADNVLEWEVVTADGRHLVATPTRNSDLYWALSGGGGGTFAVVLSMTARLHRDGIVGGTL
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Known secondary structure (DSSP)

TT

GGGG
TT

BTTBSTTS
SSSS




 .........290.........300.........310.........320.........330.........340.........350
Sequence LGFNDSAVGNEVYWEAVAAFHALLPDFLDGGNSFTYSVGNNSLTAYGTMPGADRDAVDRLLRPFLDDLAS
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Known secondary structure (DSSP) STTT
TT

SST

 .........360.........370.........380.........390.........400.........410.........420
Sequence RGITPVVQPRVSTNYYDHFFTYLGPAPYGNAAYFPFTNSRIIPRSLVTDPKSNAVVTDLFRNISQVPAFS
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Known secondary structure (DSSP) TT


SSS
STTT


B

S

STSGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence PFYCDSFSVADKPHPANSLHPAWRTGMLLCAPAGSWDWDASPEEMAARDRYAAETLQPMMDAATPGGSVY
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Known secondary structure (DSSP) S


SS








T



TTS
TSTT
B

 .........500.........510.........520.........530.........540........
Sequence LNEANHLYANWKESFYGDNYARLLRVKKKYDPDSVFYVKTGVGSEVWDVDATGRLCRA
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Known secondary structure (DSSP) TTSS
TT
TTGGG
TT

B

TT
TTGGG
TTS


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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