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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6f5dE_

Fold library idPDB HeaderMoleculeTitle
c6f5dE_3.20PDB header: hydrolaseChain: E: PDB Molecule: atp synthase subunit beta;


Added to library: Sat Feb 24 08:32:13 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VADHKGRVGHVSQVIGAVVDVHFADGVPPVLTALDVVDKLGRDEPLTLEIVQHLDAHTGRCIAMQTTDLL
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Known secondary structure (DSSP)

TTTT
TTTT



TT



SS
SS

SSSSSS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KLKAKVVSTGGNISVPVGRETLGRIFNVLGDAIDQRGPVGEKLRMPIHAVAPKLADQAAEDAVLTTGIKV
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Known secondary structure (DSSP)
TT

SSS

STTSTT

TT

B
S
S




S
SS




TTTB
SS

B


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence IDLILPYCKGGKIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLK
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Known secondary structure (DSSP) S

BTT


TTSST


T

TSS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQDVLLFIDNIFRFTQANSEVSALLGRIPAAVG
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Known secondary structure (DSSP) S




TTS
TS

TTSTT



GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence YQPTLAEDLGQLQERITSTTKGSITSVQAVYVPADDITDPAPATTFSHLDATTVLDRAVAESGIYPAVNP
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Known secondary structure (DSSP)

TTTTSS
BSS




GGG
TTSTT
SB
T
SS
B
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence LECASRIMDPDVISVDHYNVAQDVVQMLTKYRELQDIIAVLGIDELSEEDKLIVDRARKLVKFLSQPFQV
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Known secondary structure (DSSP) TT
TT
STTTS
T
STTS
T



SS
 .........430.........440.........450.........460.........470.........480.......
Sequence AEVFTGMTGHYVQLDDTIDSFSGLLMGTYDQVPEMAFYMVGGINSVLEKAKKMAEEAAELEKMRRAR
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Known secondary structure (DSSP) TSS





TTTSSS
STTTTT

STT


Download:PDB structure FASTA sequence

Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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