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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6f2wA_

Fold library idPDB HeaderMoleculeTitle
c6f2wA_3.40PDB header: transport proteinChain: A: PDB Molecule: putative amino acid/polyamine transport protein;


Added to library: Sat Apr 27 10:16:47 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKEVSGITALTVVVGTVIGAGIFFKPTAVYGAAGAPGLGLLAWFVAGIITIAGGLTVAEIGTIYPQTGGM
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Known secondary structure (DSSP)


STT
SSS
SS

SS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence MIYLEKVYGRWLGFLVGWAQMVIYYPANIAALAIIFATQFVNLFALSDSTIVPTAILTSIFLMGVNFLGT
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Known secondary structure (DSSP) TT
TTT

SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KYSGWIQTLATILKLIPLVVIIVAGLLYPGGGVIRLVPFSVETHPVLTSFGSALIATLFAYDGWINVGTL
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Known secondary structure (DSSP) TTTT
SS
SGGGG


S
SSS
TTTTTTGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence AGEMKNPGKMLPKVIIGGLSIVMAVYLLTNIAYLFVLDSSQLAGTDTPAALVASHLFEGIGSKLVTIGIL
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Known secondary structure (DSSP)
SS
TTTS
SS
S
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence ISVFGGINGYIISGLRVPYALATQKMLPFSDWFARINPKTNLPINGGLVMLGIAIVMILTGQFNQLTDLI
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Known secondary structure (DSSP) TSS
STT


TTT
S


 .........360.........370.........380.........390.........400.........410.........420
Sequence VFVIWFFITLTFIAVIILRKTQPDIERPYRVPFYPVIPLIAIIGGLYIIFNTLIVQPKNAFIGILLTLIG
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Known secondary structure (DSSP)
TTS

SS

SSTT
T
 .........430...
Sequence IPIYFYCKKKYGS
Predicted secondary structure

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Known secondary structure (DSSP) S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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