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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ey5B_

Fold library idPDB HeaderMoleculeTitle
c6ey5B_2.85PDB header: protein transportChain: B: PDB Molecule: t9ss component cytoplasmic membrane protein porm;


Added to library: Sat Feb 10 08:26:56 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RVNSITAQVIPQSQIVMSGDTYKANIVLSSVDTTQRPDVFVNGKLLSPENMGLFTATAGAPGTYPVKGYI
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Known secondary structure (DSSP)


S
SS

TTS



TT


TT

GGGTT






SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EMMGNDGVKIRRDFESEYFVTEPMASVAPTMMNVLYAGIDNPINIAVPGVAQQNVSATINNGTLTRRGNL
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TTS



SS



GGG
TTS




TTS
TTT
SSSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence WIARPTKVGSEAIISVTAQSGGRTIQMAKTTLRVRALPDPLPYIEYKDVQGNTKRFKGGRLGKREILAAG
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Known secondary structure (DSSP)


TTS


SSS








SSS


S
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GIKAALDDDLLEVNYTVVKFQLVFYDSMGNSIPEVSDGASFSERQKRQIQNLGKGKRFYVTEVIARGPDG
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Known secondary structure (DSSP) S

S
SSS


B
TT


BTTB

TT
TT

TT
 .........290...
Sequence IERKIPAIEVIVN
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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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