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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ey0A_

Fold library idPDB HeaderMoleculeTitle
c6ey0A_2.40PDB header: protein transportChain: A: PDB Molecule: t9ss component cytoplasmic membrane protein porm;


Added to library: Sat Feb 10 08:24:12 2018
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence NPEKVKVWYERSLVLQKEADSLCTFIDDLKLAIARESDGKDAKVNDIRRKDNLDASSVVMLNPINGKGST
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Known secondary structure (DSSP)

S
S
TT


SSS
S


S
TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence LRKEVDKFRELVATLMTDKAKLKLIEQALNTESGTKGKSWESSLFENMPTVAAITLLTKLQSDVRYAQGE
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SS confidence





































































Known secondary structure (DSSP) S
S
T



SSSS
TT

 .......
Sequence VLADLVK
Predicted secondary structure
SS confidence






Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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