Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6eu4C_

Fold library idPDB HeaderMoleculeTitle
c6eu4C_1.79PDB header: viral proteinChain: C: PDB Molecule: tail spike protein;


Added to library: Sat Nov 10 08:24:56 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VDVKIVNTVADLESLTANDGXVAYVKGYYQPTNFALAKPYVGGGHRIYVASRAAENDGFLCINGWVLQIE
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)


S
GGGGTT



TT
S
SS

S
TTSSS


S

GGGTT
B
SSSTT

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence NNTVSPEHAGAKLNTPSFDSAIPIQKVLISGCKVRLNGLYHTSVPVYYNSNTTIEGTGELDCGFIKTTNN
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) TT
GGGGT

SS
TTS

TSSS
SSS

SS
S
TTTS
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence TLSLGNRTINGKIXNFDVDAIXVAIPRVGDWYAQNNHLSGFTLQYDSALPTKGIGLYAPLIALSTYKSIL
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)




TT

SS


TT
SSS

TT
SS


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TKNTFEGIKSVDAWXCTWERVQASASSRSFIFGHTGTAWTPNNTTQTFIGCWATDAGLYGWDLNKXQGCT
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)
SS
S

SSSS

S
S
SSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence XISCGADFVGADGSPAKALFKIVYSNVTXVTCXNEHLHAQNFLYAEGSEVNISNFNGQAIYNKYKPATSS
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) S
SBTTB
S
S

S
S






SS
B
 .........360.........370.........380.........390.........400.........410.........420
Sequence WNNNNSXFCVVSNSKVKLTGGSFGFAYNSSDPTQGANCSALAYVEGGSVFEVSPETTFAVPLEEIGISSL
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TTB
SSS
S



TT
TTTGGG


TT

TT
SS






 .........430.........440.........450.........460.........470.........480.........490
Sequence TAFTKLGVYYTTNASVDAYVKGVRYQDGAKFSGLVXDSYLSTSAKSLGNESITNLRGSLGNAVLVQSSTA
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) S

SSS

TT
TTSTT





SS







S

GGG
TTT
SS

TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence NATVANGFPSSGVPYLVQQWSSAAGNNSYNAQLAFAISSASATFWLRTGDYGQAYASWCRLYHYRDSLIP
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) T

TTTT
SSSSS
S
SSSS


SS

TTS
B





TTS



 .........570.........580.......
Sequence AATNTYDLGSSGSTFRNAYLQNAVTVV
Predicted secondary structure














SS confidence


























Known secondary structure (DSSP) SSTT


SSBTTB

S



SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D