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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6elcA_

Fold library idPDB HeaderMoleculeTitle
c6elcA_1.41PDB header: immune systemChain: A: PDB Molecule: variant surface glycoprotein;


Added to library: Sat Jul 14 08:21:45 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AADDVNPDDNKEDFAVLCALAALANLQTTVPSIDTSGLAAYDNLQQLNLSLSSKEWKSLFQPPEGFQSDP
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Known secondary structure (DSSP)
TTS

TTTTTTTT









TS
T



TTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TWRKQWPIWVTAAAALKAENKEAAVLARAGLTNAPEELRNRARLALIPLLAQAEQIRDRLSEIQKQNEDT
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Known secondary structure (DSSP) TSTTTT
TT

TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TPTAIAKALNKAVYGQDKETGAVYNSADCFSGNVADSTQNSCKAGNQASKATTVAATIVCVCHKKNGGND
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Known secondary structure (DSSP)
S

SSS




TTTS

SSTSSTT



S


SSSSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence AANACGRLINHQSDAGANLATASSDFGDIIATCAARPPKPLTAAYLDSALAAVSARIRFKNGNGYLGKFK
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Known secondary structure (DSSP)
TTTT
TT



S


STTTTTT





SS

TT
TTS
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence ATGCTGSASEGLCVEYTALTAATMQNFYKIPWVKEISNVAEALKRTEKDAAESTLLSTWLKASENQGNSV
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Known secondary structure (DSSP) SS
S
SBTTTB
STT

GGGGGGGGGSTT
 ......
Sequence AQKLIK
Predicted secondary structure
SS confidence





Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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