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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ekkA_

Fold library idPDB HeaderMoleculeTitle
c6ekkA_1.82PDB header: transcriptionChain: A: PDB Molecule: denn domain-containing protein 1a;


Added to library: Sat Oct 20 08:40:40 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSRIKQNPETTFEVYVEVAYDPEVQRQFPEDYSDQEVLQTLTKFCFPFYVDVGQNFTFVLTDIDSKQRFG
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Known secondary structure (DSSP)


S
SS
SSS
S


STT


TS
S




S
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FCRLSSGAKSCFCILSYLPWFEVFYKLLNILADYTTKRQENQWNELLETLHKLPIPDPGVSVHLSVHSYF
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Known secondary structure (DSSP)
TTSSSS

TT





TT
SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILIICSKLSTLTACIHGSAAMLYPMYWQH
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Known secondary structure (DSSP)


TTS


BTTSS
TT
S
TTTTS


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRNMALDDVVILNVDTNTLETPFDDLQSLPNDVISSLKN
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Known secondary structure (DSSP) SS

GGGGGGGG

S
GGGTT
SS
TTTT
SS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence RLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPEEPITFCEEAFVSHYRSGAMRQFLQNATQLQLFK
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Known secondary structure (DSSP)
STTTSBTGGGGGG

SSS


T

SSTT
 .........360.........370.....
Sequence QFIDGRLDLLNSGEGFSDVFEEEIN
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Known secondary structure (DSSP) T






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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