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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ei3A_

Fold library idPDB HeaderMoleculeTitle
c6ei3A_2.10PDB header: membrane proteinChain: A: PDB Molecule: proton-dependent oligopeptide transporter family protein;


Added to library: Sat Nov 25 09:05:08 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PRQIPFIIGNEACERFSFYGMRNILVQFLITSLLLQEVGAPERDAEAKHILHSFMIGVFFFPLLGGWLAD
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Known secondary structure (DSSP)
TTTTTSS




ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence RFFGKYTTIIWFSLIYCAGHACLALFEDSRSGFFVGLGLIAFGAGGIKPLVASFMVDQFDQSNKHRAKVV
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Known secondary structure (DSSP) TTTTT
TTTTS
TT
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence FDAFYWIINFGSLFASLLIPLALKHLGPSWAFGIPGILMFIATAVFWLGRKRYVRVPLPPKDPHGFGAVV
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Known secondary structure (DSSP) T
TGGG









TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RSALLAHAPGQGRPGLALAAISVLLALACLGLTEQLGLVICLCMALVLLLAGIGGGTWWQLERARGTHPD
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Known secondary structure (DSSP)


TTT

GGG
GGGGTTTS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence AAVDGVRALLRVLVIFALVTPFFSLFDQKASTWVLQGREMRMPAWFTASQMQALNPLLVMLLIPFNNLVL
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Known secondary structure (DSSP) GGGGTTTSB

TT

GGGGGGT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YPLLRRLGWEPTSLRRMTSGIAFSGVAWIAVGAIQVAMDGGEPMHIAWQILPYALLTFGEVLVSATGIEF
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Known secondary structure (DSSP) T



TT


BGGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence AYSQAPPSMKGVVMSFWYLTTTVGNLWVLLSNVAVRNATVTSHIADTGLSEAAFLMFFFAAFAFLAALAF
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Known secondary structure (DSSP) S
GGGSSS
 .........500.........510.
Sequence GLYARRYRMVDNYRPANLYFQ
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Known secondary structure (DSSP) T















Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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