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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6egxA_

Fold library idPDB HeaderMoleculeTitle
c6egxA_4.06PDB header: virusChain: A: PDB Molecule: structural protein vp1;


Added to library: Sat Jul 21 08:22:10 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FSDGVTAMGFQSLDTQVSIKDILRRPVLLFNHVELDPDYTGFFIPIMPPSRMMQYKSGDKETSFQRLIGR
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Known secondary structure (DSSP)






TTSS
S




TS

TTSS



SGGG


TTS


SS
GGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TPQAAIMNLFRFWRGSLRYTIIIHSTDGHPIYVTHVPHTGNRVYGLMKVNNLHEYTKVPIFGCGLTTEMI
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Known secondary structure (DSSP) STTS


S




S




SSS
S

SSS
STTSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IPSVNPSICVEVPFDTENNWAVTFDEDAQRNYSWRDKGDTVTGHLVVTPVVSVYMSVWVEAGDDFEVSNF
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Known secondary structure (DSSP) BTTTBS


SS
SS


S
SS



GGG
S

SSS
 .........220.........
Sequence YGPPSVKTNDWNYAFSDEH
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Known secondary structure (DSSP)








GGGGS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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