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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6eesA_

Fold library idPDB HeaderMoleculeTitle
c6eesA_7.70PDB header: motor proteinChain: A: PDB Molecule: midasin;


Added to library: Sat Oct 20 09:13:32 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DVLIEWVAIYPQIYDILEHINYVPSNTLQRLRLHQPWSKIDYDVWFLYASDEIRETCKVKYYGETKTYGE
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Known secondary structure (DSSP)
GGGGGTTTS
TS



TT

SS



S
T
SSTTGGGS

S
TTSS


ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence VFVLENERISQLHRLFVSERAEHLKNLLFDALPLVELGGNVFFNSLVLTKSTQENLNRITPYLVQKRPIL
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Known secondary structure (DSSP) TTTTT

TT





B
SSS
B





SST

B
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAEGIGKKFLITQIAAKLGQQIIRIHLSDSTDPKMLIGTYTWQPGVLTQAVITWILFTNIEHEVLSVLLP
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Known secondary structure (DSSP)



S
TT




TT

STTTT







S

S



 .........220.........230.........240.........250.........260.........270.........280
Sequence LLEKRQLVIPSRGETIYAKGSFQMFATSSMKTKILGQRLWQILYQPDECVEVVSTLYPVLSIICPTLYSV
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Known secondary structure (DSSP) SS



TTTT





S



SS

STSB



GGG
GGG
ST
 .........290.........300.........310.........320.........330.........340.........350
Sequence YKDIFDLFSSKIYRRLCLRDFYKFIKRVAFLYHKVFKEAIDMFGAFIPSRDGFDLVVRNVAIELNIPPEK
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Known secondary structure (DSSP)








TT

TTT


SSSSS

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ALQLSSSLGLLEQLAAGVQTNEPLLLVGETGTGKTTTIQLLAGLLGQKVTVINMSQQTESSDMLGGALVK
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Known secondary structure (DSSP) GGG

T

B



SSS
T




BTTSS
S


 .........430.........440.........450.........460.........470.........480.........490
Sequence AVRSGHWVLLDEINLASLETLEPIGQLLSPHKNFRLFGCMNPEPSFRSRFTEIYVHDLLSIIQKYIGSNE
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Known secondary structure (DSSP) T


B
TTS

S
T


SS


B
B




SSTTSS









 .........500.........510.........520.........530.........540.........550.........560
Sequence HVIREVAELYQVAKSLSLDPHYTVRTLSRTLSYVTEIAPIYGLRRSLYEGFCMSFLTLLDHTSESLLYNH
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Known secondary structure (DSSP) GGG



S
TTTTTTT

TTSSS
S
T
 .........570.........580.........590.........600.........610.........620.........630
Sequence VVRFTLGNRDQQNAILKQIPKVPDYIAFCHYWLRRGQEHYIITPFVQKNLLNIARACSTRMPILIQGPTS
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Known secondary structure (DSSP)

T

TTTS





SSS







S



TT


S
ST
 .........640.........650.........660.........670.........680.........690.........700
Sequence SGKTSMIEYVAKKTGHKFVRINNHEHTDLQEVEALRNGYWIVLDELNLAPTDVLEALNRLLDDNRELFIP
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Known secondary structure (DSSP) T
TSSS




SS

TT

S


TGGG

SSTTTSSS




 .........710.........720.........730.........740.........750.........760.........770
Sequence QVLVKPHPEFMLFATQNPGRKHLSRAFRNRFLEIHFENELETILHKRCKPSYAAKIVQVFRELSLRRATL
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Known secondary structure (DSSP)






SS







S


TTGGGSS










 .........780.........790.........800.........810.........820.........830.........840
Sequence RDLFRWAFREAVGYQQLAENGYMLLAERARDQKDKLAVQEVIEKVMSKVVWTRPMIRLFCLVWRCLLAKE
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Known secondary structure (DSSP)


SSTSS
SS






T
 .........850.........860.........870.........880.........890.........900.........910
Sequence PVLLVCGKTTVCQILAECLHKELHIINAHGDIIGAQRPVRRSAVNYSLHSQLCEKFIDDLIEKFEKLNLI
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Known secondary structure (DSSP)






TT





GGGT








TS




 .........920.........930.........940.........950.........960.........970.........980
Sequence ERQIIKHDGALVTAMKDFFLLDEISLADDSVLERLNSVLELSRTLTLAVSLTAKDGFAFFATMNPGGKKE
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Known secondary structure (DSSP) T






SGGGS
SSS


B



B



SS
B











 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LSPALRNRFTEIWVPTEDILKIVEGKLHNNKIELARPLVEYAKWHANEYLYTDVISIRDVLSAVEFINAC
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Known secondary structure (DSSP)

TS






S
SS

TTSS





T
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence EILDLNLVLFNAVSMVFIDALLASLHAERQRCFAKLNELAHTDTTLMNASKVLRALQVLKPILLEGSPGV
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Known secondary structure (DSSP)
SS
TTTTT

T


STSSS


TT
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence GKTSLITALARETGHQLVRINLSDQTDLMDLFGSDAPFLAAMRNGHWVLLDELNLASQSVLEGLNACLDH
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Known secondary structure (DSSP)
TTTTTTSTT



SS

T



S


GGGS
TTSS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence RNEAYIPELDKVFHPNFRVFAAQNPQGLPRSFINRFSVVYVALKEKDMIEIAACNYHQVNEDWRLKIIKF
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Known secondary structure (DSSP) S



SSSSS



TT









TTTTTTS



TTTTTSS
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence MFRLQDNIEKDISGSPWEFNLRDTLRWLQLLNDADYLEVMVLHRMRTVEDRVRTCELFKEVFDIDYEPRT
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Known secondary structure (DSSP) TTS








TT

TTSS


S
S





 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence IGFSLSSQCFKVGHSLLVRDQKTLLDSQNILQSQLPVLESVITCINKKWPCILVGDTATGKTCILRLLAA
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Known secondary structure (DSSP)



SS

SS
















GGGTT


S
TTSSS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence IAGAKIKEMAVNSDTDTMDLIDISRKASELFTDLSQQLLNIVIKYRNFDIFRETSLYTLTTSQAFTLLQK
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Known secondary structure (DSSP) T

TTS




STT


TT


TT
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence VVDQLDETLVHSLGDIHEKARKLLAEFSASPAGGYLLKAVEEGHWFVLDNANLCSPAVLDRLNSLLELIV
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Known secondary structure (DSSP)

GGGTTS





TTSS
TTTSS




 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence NEKTTEDGHPKTIKPHPNFRLFLTVNPVYGELSRAMRNRGVEIFLLKEALTEIDKKQMSLLEPAPISSAV
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Known secondary structure (DSSP)

SSS
SS







TT



SSS



TTS







TTTSSS

SS

S
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence DTLASNISYIKYVFETMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) STTS



S



SSSS
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TT

S

SS
STTTTTTTS
S


TTT


 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKRTYQVMIS
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Known secondary structure (DSSP)




SS




T




TTT





 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence IDDSKSMSESGSTVLALETLALVTKALSLLEVGQIAVMKFGEQPELLHPFDKQFSSESGVQMFSHFTFEQ
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Known secondary structure (DSSP)
SGGGGSS


TT

SSS
TTTS
ST


S
 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence SNTNVLALADASMKCFNYANTASHHRSNSDIRQLEIIISDGICEDHDSIRKLLRRAQEEKVMIVFVILDN
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Known secondary structure (DSSP) S





T
S

SS

TTGGGTT

S
 .........1970.........1980.........1990.........2000.........2010.........2020...
Sequence VNTQKKSSILDIKKVYYDTKEDGTMDLKIQPYIDEFAFDYYLVVRNIEELPQLLSSALRQWFQ
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Known secondary structure (DSSP)
SS

TT

TTTS
TTTS
SSGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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