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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ed1B_

Fold library idPDB HeaderMoleculeTitle
c6ed1B_2.90PDB header: hydrolaseChain: B: PDB Molecule: glycosyl hydrolase family 2, sugar binding domain protein;


Added to library: Sat Feb 16 08:31:42 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FQSNASEISITDSWKYKAENDERFSSMDWNDSDWVTVDLPHTWNAGDVIDEQRGYRRGISWYRKKLFIPS
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Known secondary structure (DSSP)







SSSS

GGGGSTT

GGGS
SS

S
TTGGGSSSSS


S

G
 .........80.........90.........100.........110.........120.........130.........140
Sequence EARDKKITLRFDGVASKADVYLNGKLLKTHLGAYTAFGVDITDICEVGKENLLAVKVDNSSSLGEILPPV
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Known secondary structure (DSSP) GGTTSS
BSSTT

SSS

TTT

TTS

GGGGGTSS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SGDFSIFGGIYRRVFLQWTEKVHFVTEPYAAVPVRIQTPEVSVSEASMQIVAFLKNDFTDTKHVHVNVFL
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Known secondary structure (DSSP) S
SS



SB
S

S

TTTT

SS
SS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence CDEMNRIVKEKQLKLKLIPGRKYPISTSVGRIENPHLWSPELPYLYTVKVQVCDAKNGEMYQEVISPVGF
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Known secondary structure (DSSP)
TT


TT


B


S


B
SSSB

SSS



 .........290.........300.........310.........320.........330.........340.........350
Sequence RWFSVDKTGFYLNGKYLKLRGAARHQDYAGLGTAIPVEMNRRDMRLLKEMGANFVRISHYPQDPEIYRAC
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Known secondary structure (DSSP)

TTTT

S
BTTTBT


TTTTT
S
SS


 .........360.........370.........380.........390.........400.........410.........420
Sequence DELGLIVWSEICVVNEVRKNTAFAHNCKEMLKEMILQNYNHPSVVLWGAMNELWDYHKQAIALARELEAL
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Known secondary structure (DSSP) TT
S


SSS
S
TT

S


 .........430.........440.........450.........460.........470.........480.........490
Sequence KKELDPYRLSCVAFHAFTWEKPYTQSSKEMFSISDVNGVNVYESWYQGDSATIAPMFDKFCSYSTAKPRF
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Known secondary structure (DSSP)
TTS


TTSTTTTSS

GGGSSSS

BTTTB

TTS
SSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LSEFGAGSDERIHSYTPRTFDFTPEFQLDFNRRYINEMEKRPDYIGYSIWNLVDFQVDGRGDSKPNLNQK
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Known secondary structure (DSSP)





TT
SS

TTS

T
TTS
SB

TT

SSSTT

 .........570.........580.........590.........600.........610.........620.........630
Sequence GMLTEDRRKKEIYYYCQARWSDIPMIHIAGADWTKRVEICDDSINVRKISVFSNQKTVELIHNGKSLGVR
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Known secondary structure (DSSP)
SB
TT

B


S

S
TT



SS

SSSTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence EVVNGEAVFAVPFINGENLLDARSGALSDRLKIQMKLLSSRLTDSDVLLDGLCINLGQEHCYFIDPQLQE
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Known secondary structure (DSSP)
BTT

STT
SSTTSST
TT
SS
TTTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence IWIPDKPYTKGSWGYMDGKPFNSWPGSSHDGVRYGVGADIKNTFLEPLFQTFLIGTTCYRLDVPDGVYEI
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Known secondary structure (DSSP)

B

TTSSS




SSSTTTTTS
S




BT
S
TS
S




S
 .........780.........790.........800.........810.........820.........830.........840
Sequence GFYFTEPFSKDERKNIVRTGVSAEGQRVFDVSVNGEKLIDSLNLADSYGEQTAVVKTLVVNVRNHEGLEI
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Known secondary structure (DSSP)


S
TTGGGST

TTS

TT
TTB

TT

 .........850.........860
Sequence LLSPQKGQGVISGLKVKKIR
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Known secondary structure (DSSP) S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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