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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6e8dA_

Fold library idPDB HeaderMoleculeTitle
c6e8dA_2.34PDB header: dna binding proteinChain: A: PDB Molecule: beta sliding clamp,dna mismatch repair protein mutl;


Added to library: Sat May 4 08:20:49 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NLYFQSHMMKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDDGVSFTGSDSDISIESFIPKEEG
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Known secondary structure (DSSP)




S
S
TT

SS
SSGGGG
SS
SSSBSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DKEIVTIEQPGSIVLQARFFSEIVKKLPMATVEIEVQNQYLTIIRSGKAEFNLNGLDADEYPHLPQIEEH
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Known secondary structure (DSSP) SSB

T
SSS
TTSTT
B
GGGS








 .........150.........160.........170.........180.........190.........200.........210
Sequence HAIQIPTDLLKNLIRQTVFAVSTSETRPILTGVNWKVEQSELLCTATDSHRLALRKAKLDIPEDRSYNVV
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Known secondary structure (DSSP) S
TTGGGS


SSSGGGG
SS
SS
SS
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence IPGKSLTELSKILDDNQELVDIVITETQVLFKAKNVLFFSRLLDGNYPDTTSLIPQDSKTEIIVNTKEFL
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Known secondary structure (DSSP) S
SSSS
SSTT


S




TTTS
S

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence QAIDRASLLARNVVKLSAKPAESIEISSNSPEIGKVVEAIVADQIEGEELNISFSPKYMLDALKVLEGAE
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Known secondary structure (DSSP) TTT




TTS
TTT

SS


TT

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IRVSFTGAMRPFLIRTPNDETIVQLILPVRTYVEPEVQEMIVPLTFHYSTNEALIIEQHKQELESVGVFL
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Known secondary structure (DSSP) SSSSS
TT









TT
 .........430.........440.........450.........460.....
Sequence ESFGSNSYIVRCHPAWFPKGEEAELIEEIIQQVLDSLREEAAIMM
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Known secondary structure (DSSP)


BTTTTS
TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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