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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6e4rB_

Fold library idPDB HeaderMoleculeTitle
c6e4rB_2.06PDB header: transferaseChain: B: PDB Molecule: polypeptide n-acetylgalactosaminyltransferase 9;


Added to library: Sat Sep 15 08:34:45 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GGGPGELGKPVRLPKEMSDEMKKAVDDGWTKNAFNQYVSDLISVHRTLPDPRDAWCKDEARYLTNLPKTD
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Known secondary structure (DSSP)


TTGGG





SS

SS
S
TT







T



SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence VIICFHNEAWTVLLRTVHSVLDRSPEHLIGKIILVDDYSDMPHLKRQLEDYFAAYPKVQIIRGQKREGLI
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Known secondary structure (DSSP) SS

S
GGG
S


GGGTTT
TT
SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence RARILGANHAKSPVLTYLDSHCECTEGWLEPLLDRIARNSTTVVCPVIDVISDETLEYHYRDSGGVNVGG
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Known secondary structure (DSSP)

SSTT
TT

TT
TTT




GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence FDWNLQFSWHPVPERERKRHNSTAEPVYSPTMAGGLFSIDREFFDRLGTYDSGFDIWGGENLELSFKTWM
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Known secondary structure (DSSP)
TTS


TT
SSTTS

SB

SSSTTSS
TT

SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence CGGTLEIVPCSHVGHIFRKNVLKKNSVRLAEVWMDEYSQYYYHRIGNDKGDWGDVSDRRKLRNDLKCKSF
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Known secondary structure (DSSP) TT




TT
GGGTTT







TT


 .........360.........370.........380.........390.........400.........410.........420
Sequence KWYLDNIYPELFIPGDSVAHGEIANVPNGMCLDAKEKSEEETPVSIYECHGQGGNQYWMLSKAGEIRRDD
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Known secondary structure (DSSP) T
TTS

GGGSS
GGGT

TT
SS



S

GGG

TTS
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence SCLDYAGKDVTLFGCHGGKGNQFWTYRENTKQLHHGTSGKCLAISESKDKLLMEECSASLSRQQWTLENY
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Known secondary structure (DSSP) SSS


S

GGG
TTTTTTT


TTSS



TT
GGG

TT
 .....
Sequence DSSKL
Predicted secondary structure




SS confidence




Known secondary structure (DSSP)
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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