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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6e3dA_

Fold library idPDB HeaderMoleculeTitle
c6e3dA_1.27PDB header: metal binding proteinChain: A: PDB Molecule: periplasmic dipeptide-binding lipoprotein dppa;


Added to library: Sat Sep 14 09:08:28 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PDVVLVNGGEPPNPLIPTGTNDSNGGRIIDRLFAGLMSYDAVGKPSLEVAQSIESADNVNYRITVKPGWK
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Known secondary structure (DSSP)

S


SS
S
GGG

S


S
TTS
SS
SSSS
TT
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence FTDGSPVTAHSFVDAWNYGALSTNAQLQQHFFSPIEGFDDVAGAPGAASRTTMSGLRVVNDLEFTVRLKA
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Known secondary structure (DSSP)
TTS
B


GGG

TTGGGGTTBTTSSSSS
TT

S
TTTTBSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PTIDFTLRLGHSSFYPLPDSAFRDMAAFGRNPIGNGPYKLADGPAGPAWEHNVRIDLVPNPDYHGNRKPR
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Known secondary structure (DSSP)

TTTTGGGGSGGG




S



SS


SSS
STTT
TT

STT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NKGLRFEFYANLDTAYADLLSGNLDVLDTIPPSALTVYQRDLGDHATSGPAAINQTLDTPLRLPHFGGEE
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Known secondary structure (DSSP) SS

S
TS
SSS

GGGTTTGGG

TTSTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence GRLRRLALSAAINRPQICQQIFAGTRSPARDFTARSLPGFDPNLPGNEVLDYDPQRARRLWAQADAISPW
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Known secondary structure (DSSP) T

TSTT

SSSS
TTSTT

TT
TTGGGGS

S

 .........360.........370.........380.........390.........400.........410.........420
Sequence SGRYAIAYNADAGHRDWVDAVANSIKNVLGIDAVAAPQPTFAGFRTQITNRAIDSAFRAGWRGDYPSMIE
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Known secondary structure (DSSP)
SGGGT

SS
TT


S

B
SSS
GGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence FLAPLFTAGAGSNDVGYINPEFDAALAAAEAAPTLTESHELVNDAQRILFHDMPVVPLWDYISVVGWSSQ
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Known secondary structure (DSSP) GTSTT
TT

S



T
SS
SS
TT
 .........500.........510
Sequence VSNVTVTWNGLPDYENIVKA
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Known secondary structure (DSSP)


B
TTS
B
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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