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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6e2fC_

Fold library idPDB HeaderMoleculeTitle
c6e2fC_3.90PDB header: membrane proteinChain: C: PDB Molecule: transient receptor potential cation channel subfamily v


Added to library: Sat Aug 25 10:24:31 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SWAQSRDEQNLLQQKRIWESPLLLAAKDNDVQALNKLLKYEDCKVHQRGAMGETALHIAALYDNLEAAMV
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Known secondary structure (DSSP)

TT
S


S



TTS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LMEAAPELVFEPMTSELYEGQTALHIAVVNQNMNLVRALLARRASVSARATGTAFRRSPCNLIYFGEHPL
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Known secondary structure (DSSP)
SSGGG



SSSS
S

TS

S
TT

S





STTS

SSSS



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SFAACVNSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDRHGDHLQPLDLVPN
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Known secondary structure (DSSP) TT
TTT

S



TT


T
SS
GGGTT

S

SS

SSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence HQGLTPFKLAGVEGNTVMFQHLMQKRKHTQWTYGPLTSTLYDLTEIDSSGDEQSLLELIITTKKREARQI
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Known secondary structure (DSSP) TT


T
TTT




TT

STTSS
STT
TTT


SGGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LDQTPVKELVSLKWKRYGRPYFCMLGAIYLLYIICFTMCCIYRPLKPRTNNRTSPRDNTLLQQKLLQEAY
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Known secondary structure (DSSP) GGSTTT







S



SSSS







SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence MTPKDDIRLVGELVTVIGAIIILLVEVPDIFRMGVTRFFGQTILGGPFHVLIITYAFMVLVTMVMRLISA
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Known secondary structure (DSSP)
SSTS
S


TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence SGEVVPMSFALVLGWCNVMYFARGFQMLGPFTIMIQKMIFGDLMRFCWLMAVVILGFASAFYIIFQTEDP
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Known secondary structure (DSSP) S

GGGGGGSSSSS

TTTTTSS
T
 .........500.........510.........520.........530.........540.........550.........560
Sequence EELGHFYDYPMALFSTFELFLTIIDGPANYNVDLPFMYSITYAAFAIIATLLMLNLLIAMMGDTHWRVAH
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Known secondary structure (DSSP) TSSTT
SSTT
S




SSS


TTTTTSSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence ERDELWRAQIVATTVMLERKLPRCLWPRSGICGREYGLGDRWFLRVEDRQDLNRQRIQRYAQAFHTRRST
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Known secondary structure (DSSP) TS
SSSS
SSSB

SSSSS
S

B








 .........640.......
Sequence SRSSANWERLRQGTLRR
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Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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