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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6e14D_

Fold library idPDB HeaderMoleculeTitle
c6e14D_4.00PDB header: membrane proteinChain: D: PDB Molecule: fimbrial biogenesis outer membrane usher protein;


Added to library: Sat Oct 20 08:48:24 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LYFNPRFLADDPQAVADLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQLAS
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Known secondary structure (DSSP)



TTTTSSSS


S
ST







S

SSS






SSSS


TTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence MGLNTASVAGMNLLADDACVPLTTMVQDATAHLDVGQQRLNLTIPQAFMSNRARGYIPPELWDPGINAGL
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Known secondary structure (DSSP) TTB
STTSTTSTTS
SSS


SSS

TTTT


TTSB



TT


TTS




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSNKWQHINTWLERDIIPLRSRLTLG
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Known secondary structure (DSSP)

SSS



TT





SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTIND
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Known secondary structure (DSSP)

TTTS



SSSS
GGGSS



SSSTT
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence IYAAGNSGDLQVTIKEADGSTQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEKPRFFQSTLLHGL
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Known secondary structure (DSSP)



STT


SSS
B






SS


TT




TTB


 .........360.........370.........380.........390.........400.........410.........420
Sequence PAGWTIYGGTQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNI
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Known secondary structure (DSSP) TTT
SS
TT
TTT




SSSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence QLVGYRYSTSGYFNFADTTYSRMNYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQA
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Known secondary structure (DSSP)
TT


B











SSSSSS

 .........500.........510.........520.........530.........540.........550.........560
Sequence GLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNL
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Known secondary structure (DSSP) SSS


SSS


SSSS


S

SS
S
SSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence AGVYGTLLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLAH
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Known secondary structure (DSSP)
SSS

B
STTT

B


SS

SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence ANGVTLGQPLNDTVVLVKAPGAKDAKVENQTGVRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNA
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Known secondary structure (DSSP) TTS

SS

TT
SS


SS
SS



SS

SS

SSS


B



TT

SSB

S

 .........710.........720.........730.........740.........750.........760.........770
Sequence VANVVPTRGAIVRAEFKARVGIKLLMTLTHNNKPLPFGAMVTSESSQSSGIVADNGQVYLSGMPLAGKVQ
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Known secondary structure (DSSP)
B




TT


B



BS
BSSS
B

SS

SSSS
GGG
SS
 .........780.........790.........800.....
Sequence VKWGEEENAHCVANYQLPPESQQQLLTQLSAECRS
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Known secondary structure (DSSP)
SSSS






SS

S
S

B







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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