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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6dxuA_

Fold library idPDB HeaderMoleculeTitle
c6dxuA_1.90PDB header: hydrolaseChain: A: PDB Molecule: glycosyl hydrolase family 2, tim barrel domain protein;


Added to library: Sat Mar 2 08:36:10 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NKIRLTNNWEYLKGDLGGIWEAVRPAAPGSSEAVPIWQPVTLPHCFNAEDAVDPDVNYYEGPGWYKTLLA
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Known secondary structure (DSSP)


SSS

SSS


TTSGGG
S


SS

TTTTTTT
TTS



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence IDNPYRNGRIVLDFDGAGQKTDVYVYTTHVGSHVGGYDSWNVDITDAVKAFLGSKDAERFKGKVPLSIRC
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Known secondary structure (DSSP)



STT
S

BSTT
SSS

TSGGGGGGTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DNSRDLEMIPSDLADFNIYGGLYRYLNLVYLPEVSFEQIHLESSLSSNLKEGILKVKTSFYNPEDIRKAD
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Known secondary structure (DSSP)



TTSSS
TTSSS



BS
S

SS
TTSS
TT



 .........220.........230.........240.........250.........260.........270.........280
Sequence VTVSVYDVDRKPVFSKTLEGILPLGDQLLAKMKIKNPVLWDVDVPQLYTCELTVKTPDQTFTTEERFGFR
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Known secondary structure (DSSP)
TTS


SSS

B

SSS


TT
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence HTEFKDKGPFFLNGKRLLLRGTHRHEDHAGVAQAMTEDMMRREMRMMKDMGVNFIRLGHYQQSEIILDLC
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Known secondary structure (DSSP)

TTS
TT



S
BTTTBT


TT


TTS


 .........360.........370.........380.........390.........400.........410.........420
Sequence DELGILVWEEIPWCRGGLGGDVYKKQARRMLANMIVQHHNHPAVIIWGLGNENDWPNDFNTFDKSAIRAF
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Known secondary structure (DSSP) T



BSS



TT
TT
TT


SSS


 .........430.........440.........450.........460.........470.........480.........490
Sequence MKELHDMAHRLDDTRMTAIRRCEFCNDIVDVYSPSIWAGWYRGVFTDYKSISEQEMQKVKHFLHVEWGGD
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Known secondary structure (DSSP)
TTSS
GGGTTTSS



BTTTBS
GGGTTSSSB





 .........500.........510.........520.........530.........540.........550.........560
Sequence SHARRHSEDAFYNLKDGDWSESYVVRLIDWHLKEQETMPWLTGTAYWPFKDFSTPVRPDNPVPYVNQKGV
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Known secondary structure (DSSP) B
TT


GGGS

B


TBSTT
TT


S
SB

TT
TTSSSTT


S
 .........570.........580.........590.........600.........610.........620.........630
Sequence VERDFTPKESYYVFQSYWTEKPMIHIYGHTWPVRWGGKDDRKEILVYSNCDEVELFVNGVSQGVKRRNSQ
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Known secondary structure (DSSP) B
TTS
B


S

S
TT



TT

SSTT

TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence DYPAAGLRWNCVYQEGMNEIRAVGVKKKEKKEVSDVIRQEYQTAKWDKEAACQVSLLSEEGDTALVQVQL
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Known secondary structure (DSSP) STTGGG


STTTT




S

TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence IDKNGIRCLSSKKQITFEIAGDGSLICNLGTSTGSRKVQAYNGRALIRIKRNEGNSVVAVKSEGLPTAFL
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Known secondary structure (DSSP)
TTS
B
TT


S


SSSTTS
S
BTT
TTS

TTS

 ....
Sequence ELKS
Predicted secondary structure
SS confidence



Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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