PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6drkD_

Fold library id	PDB Header	Molecule	Title
c6drkD_	3.80	PDB header: transport protein	Chain: D: PDB Molecule: transient receptor potential cation channel, subfamily m,

Links to external resources
Added to library: Sat Sep 22 09:04:00 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S L A S W I K E N I K K K E C V R E T P T D A F G D I S F G G L G Q K T G K Y V R V S S D T S C E N L Y Q L M T E Q W K L R S P N L L I S V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S
T T
S S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T G G A K N F Y I K T H L K D K F R R G L I K V A Q T T G A W I L T G G T H A G V M K H V G M A V R D Y T L S S G S M E G Q I V V I G V A P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T T
S S S T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence W G V I H N R S T L I H P E G R F P A Y Y S L D E Q G Q G R L S C L D I N H T H F L L V D D G T Q G H Y G V E I E L R A R L E K L I S K L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S B T T G G G T
S S
T T
T T
S S S B
S S
S
S
T T
S
S G G G S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L G N R E S G V T I P V V C V V L D G G P G T L N T I Y N S M L N H T P C V V L E G S G R L A D V I A H V A S V P V S K V T M A L I N R L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S S S
S S
T T
S S S T T S
S T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence K R F F M Q E Y K N F T E L Q I I E W T K K I Q D I L R M P H L L T V F R I D E D K N Y D V D V A I L Q A L L K A S R S D E H A G R H C W E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S T T T T
T T T T T
T T S
T T T
T T
S S S
S T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence R Q L E L A V A W N R V D I A E S E I F T E E S Q W T S S D L H P A M F S A L V G D K P E F V R L L L E N G V C V R E F L E R E E T L C E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T
T T
S S T T T T
T T
T
S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence Y S H L P S C F F L R K L A K R V Q V C L S H V S E E V R H L L G S F T Q P L Y I A S R Y K P D T V W D P G R D L F L W A V V Q N N R E L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S
T
T
S S S
S
T T
T T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence E I G W E Q C R D C I A A A L A A S K I L R K L A Q E S G E D D S E E A T E M L E L A N H Y E K Q A I G V F S E C H S W D A Q R A Q K L L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
S S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence R I S P S W G R S T C L W L A L E A H D K S F I A H S G V Q A L L T Q I W C G E L S V D N P H W K V L L C M I F F P L I Y T G F L T F R R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T T T S
B S T T
T S T
S S
S S
S T
S S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence E D I Q R Q A E R T E Q Q K L A M E S E L K P L N C S S R L M S F L K S P Q V K F Y W N I A S Y F G F L W L F A V V L M I D F Q T S P S W R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T S T S
S S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence E L L L Y V W L T S L V C E E I R Q L Y H D F D G S G F R R K A K M Y I K D L W N I L D V L S I V L F I A G L I C R L Q A S D T V F Y I G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S
S S S S T T S T S
S S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence V I L C I D F I I F C L R L M A I F S I S R T L G P K I I I V R R M M L D L F F F M F L L S I W V V A Y G V A K Q G I L I E N E E R L N W I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S S T T T T S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence I R G A V Y E P Y I T I F G N F P T N I D N T L F D I S S C S V N A S D P L K P K C P M L N A D N T P V F P E W L T I M M L C V Y L L F A N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
S S S S
S S S
T T T
B S S T T
B S S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence I L L L N L L I A I F N Y T F Q E V Q D N T D T I W K F Q R Y E L I K E Y H S R P A L P P P F I L L S H L I L F I R G V F L R D L P Q R H K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T S
S S
T T S T T S
T T T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence N F R Q E L E Q T E E E E L L S W E A Y M K D N Y L A S T R Q D E S Q S V E H R I H D T A E K V G A M S E L L E R E Q E M V S A T E E A P H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T S
-
-
S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence M F A R Q L Q Y P D S T V R R F P V P E E K V S W E V N F S P Y Q P P V Y N Q Q A L D K H R N P G G R T G I R G K G A L N T L G P N H I L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T
S B
T T S S
B
S T T
S S S S
T T
B
T T S
S S
S
B S
S
S S S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence P I F T R W R D A E H K V L E F L A V W E D A E K R W A L L G G P A Q P D E P L A Q V L E R I L G K K L N E K T K T L L K A G E E V Y K G Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T
S
T T T
T T
T
S
T T T S
S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence V D D S R N T D N A W V E T S I I T L H C D K N T P L M A D L N H M V E S S L S S H Q P L Q W R E V S S D A C R C S Y Q R E A L R Q I A H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
S S
T T T
S S
S S S
S
S S S

. . . . .

Sequence H N T Y F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	A	S	W	I	K	E	N	I	K	K	K	E	C	V	R	E	T	P	T	D	A	F	G	D	I	S	F	G	G	L	G	Q	K	T	G	K	Y	V	R	V	S	S	D	T	S	C	E	N	L	Y	Q	L	M	T	E	Q	W	K	L	R	S	P	N	L	L	I	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S																					S	S		T	T										S	S												T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	G	G	A	K	N	F	Y	I	K	T	H	L	K	D	K	F	R	R	G	L	I	K	V	A	Q	T	T	G	A	W	I	L	T	G	G	T	H	A	G	V	M	K	H	V	G	M	A	V	R	D	Y	T	L	S	S	G	S	M	E	G	Q	I	V	V	I	G	V	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S						T	T																T	T								S	S	S	T																				S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	W	G	V	I	H	N	R	S	T	L	I	H	P	E	G	R	F	P	A	Y	Y	S	L	D	E	Q	G	Q	G	R	L	S	C	L	D	I	N	H	T	H	F	L	L	V	D	D	G	T	Q	G	H	Y	G	V	E	I	E	L	R	A	R	L	E	K	L	I	S	K	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	B	T	T	G	G	G	T			S	S			T	T								T	T		S	S	S	B				S	S		S								S		T	T		S			S												G	G	G	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	G	N	R	E	S	G	V	T	I	P	V	V	C	V	V	L	D	G	G	P	G	T	L	N	T	I	Y	N	S	M	L	N	H	T	P	C	V	V	L	E	G	S	G	R	L	A	D	V	I	A	H	V	A	S	V	P	V	S	K	V	T	M	A	L	I	N	R	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	S	S											S	S			T	T																				S	S	S										T	T	S		S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	R	F	F	M	Q	E	Y	K	N	F	T	E	L	Q	I	I	E	W	T	K	K	I	Q	D	I	L	R	M	P	H	L	L	T	V	F	R	I	D	E	D	K	N	Y	D	V	D	V	A	I	L	Q	A	L	L	K	A	S	R	S	D	E	H	A	G	R	H	C	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		S	S	T	T	T	T			T	T	T												T	T		T	T	S					T	T	T		T	T																		S	S	S			S	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	Q	L	E	L	A	V	A	W	N	R	V	D	I	A	E	S	E	I	F	T	E	E	S	Q	W	T	S	S	D	L	H	P	A	M	F	S	A	L	V	G	D	K	P	E	F	V	R	L	L	L	E	N	G	V	C	V	R	E	F	L	E	R	E	E	T	L	C	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S										T		T	T					S	S	T	T										T	T											T	T							T		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	S	H	L	P	S	C	F	F	L	R	K	L	A	K	R	V	Q	V	C	L	S	H	V	S	E	E	V	R	H	L	L	G	S	F	T	Q	P	L	Y	I	A	S	R	Y	K	P	D	T	V	W	D	P	G	R	D	L	F	L	W	A	V	V	Q	N	N	R	E	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G			S											T				T													S	S	S			S			T	T																				T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	I	G	W	E	Q	C	R	D	C	I	A	A	A	L	A	A	S	K	I	L	R	K	L	A	Q	E	S	G	E	D	D	S	E	E	A	T	E	M	L	E	L	A	N	H	Y	E	K	Q	A	I	G	V	F	S	E	C	H	S	W	D	A	Q	R	A	Q	K	L	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		S	S																					S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	I	S	P	S	W	G	R	S	T	C	L	W	L	A	L	E	A	H	D	K	S	F	I	A	H	S	G	V	Q	A	L	L	T	Q	I	W	C	G	E	L	S	V	D	N	P	H	W	K	V	L	L	C	M	I	F	F	P	L	I	Y	T	G	F	L	T	F	R	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		T	T	T	T	S		B	S							T	T						T	S												T		S	S		S	S												S	T							S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	D	I	Q	R	Q	A	E	R	T	E	Q	Q	K	L	A	M	E	S	E	L	K	P	L	N	C	S	S	R	L	M	S	F	L	K	S	P	Q	V	K	F	Y	W	N	I	A	S	Y	F	G	F	L	W	L	F	A	V	V	L	M	I	D	F	Q	T	S	P	S	W	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										S	S							T	T	S																									T	S			S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	L	L	L	Y	V	W	L	T	S	L	V	C	E	E	I	R	Q	L	Y	H	D	F	D	G	S	G	F	R	R	K	A	K	M	Y	I	K	D	L	W	N	I	L	D	V	L	S	I	V	L	F	I	A	G	L	I	C	R	L	Q	A	S	D	T	V	F	Y	I	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	S	S	S		S	S	S	S							T	T	S	T																					S			S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	V	I	L	C	I	D	F	I	I	F	C	L	R	L	M	A	I	F	S	I	S	R	T	L	G	P	K	I	I	I	V	R	R	M	M	L	D	L	F	F	F	M	F	L	L	S	I	W	V	V	A	Y	G	V	A	K	Q	G	I	L	I	E	N	E	E	R	L	N	W	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T					T	T	S	S	T	T	T										T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	I	R	G	A	V	Y	E	P	Y	I	T	I	F	G	N	F	P	T	N	I	D	N	T	L	F	D	I	S	S	C	S	V	N	A	S	D	P	L	K	P	K	C	P	M	L	N	A	D	N	T	P	V	F	P	E	W	L	T	I	M	M	L	C	V	Y	L	L	F	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T							T	T	S										S	S	S	S				S	S	S			T	T	T							B	S	S	T	T		B	S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	I	L	L	L	N	L	L	I	A	I	F	N	Y	T	F	Q	E	V	Q	D	N	T	D	T	I	W	K	F	Q	R	Y	E	L	I	K	E	Y	H	S	R	P	A	L	P	P	P	F	I	L	L	S	H	L	I	L	F	I	R	G	V	F	L	R	D	L	P	Q	R	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			G	G	G																	T	T	S		S	S		T	T	S													T	T	S						T	T	T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	N	F	R	Q	E	L	E	Q	T	E	E	E	E	L	L	S	W	E	A	Y	M	K	D	N	Y	L	A	S	T	R	Q	D	E	S	Q	S	V	E	H	R	I	H	D	T	A	E	K	V	G	A	M	S	E	L	L	E	R	E	Q	E	M	V	S	A	T	E	E	A	P	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S																															T	T	S																						-			-								S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	M	F	A	R	Q	L	Q	Y	P	D	S	T	V	R	R	F	P	V	P	E	E	K	V	S	W	E	V	N	F	S	P	Y	Q	P	P	V	Y	N	Q	Q	A	L	D	K	H	R	N	P	G	G	R	T	G	I	R	G	K	G	A	L	N	T	L	G	P	N	H	I	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T		S	B		T	T	S	S		B						S	T	T		S	S	S	S			T	T					B						T	T	S				S	S				S		B	S			S		S	S	S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	P	I	F	T	R	W	R	D	A	E	H	K	V	L	E	F	L	A	V	W	E	D	A	E	K	R	W	A	L	L	G	G	P	A	Q	P	D	E	P	L	A	Q	V	L	E	R	I	L	G	K	K	L	N	E	K	T	K	T	L	L	K	A	G	E	E	V	Y	K	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	T	T			S									T	T	T												T	T												T		S								T	T	T	S				S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	V	D	D	S	R	N	T	D	N	A	W	V	E	T	S	I	I	T	L	H	C	D	K	N	T	P	L	M	A	D	L	N	H	M	V	E	S	S	L	S	S	H	Q	P	L	Q	W	R	E	V	S	S	D	A	C	R	C	S	Y	Q	R	E	A	L	R	Q	I	A	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			S	S														S	S		T	T							T		S	S		S	S	S		S											S	S	S
	.	.	.	.	.
Sequence	H	N	T	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G