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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6djsA_

Fold library idPDB HeaderMoleculeTitle
c6djsA_5.80PDB header: transport proteinChain: A: PDB Molecule: short transient receptor potential channel 3;


Added to library: Sat Sep 1 08:53:20 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TAEEERFLDAAEYGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDAL
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Known secondary structure (DSSP)
S

TSS

STTTT
SSTT


SSS


SS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLAISKGYVRIVEAILNHPGFAITPIILAAHCQKYEVVHMLLMKGARCGDCMEKQRHDSFSHSRSRINAY
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Known secondary structure (DSSP) SS
TTSTT



TT
S




SSS
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence KGLASPAYLSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILN
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Known secondary structure (DSSP) TTSSSSSSS
SSS


TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence GDLESAEPLEVHRHKASLSRVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTTS
TT



SGGGT


TT

TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TS


TT


TT
S
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TT


SSTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence XXXXXXXXXXXXXXXXXXXXXXXTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELL
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Known secondary structure (DSSP)



TTS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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