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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6dj8B_

Fold library idPDB HeaderMoleculeTitle
c6dj8B_2.05PDB header: dna binding proteinChain: B: PDB Molecule: beta sliding clamp;


Added to library: Sat Jun 1 08:22:52 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NTFFICETNQIMNEIEKAKGIILNRNMNDIWSALLIEVKKSNLIIKSTDRNIFFESTISIVSETDFKVLI
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Known secondary structure (DSSP)

GGG




TT
GGGTT
SSS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NASNFYDAVKAFNFYKKIKIVFNENNSKLEIMGEEYEDHLKEPTFSYEEIENYNYDMVNEDYTFGIEIKQ
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Known secondary structure (DSSP) TTTSSTTTT







GGG









 .........150.........160.........170.........180.........190.........200.........210
Sequence KSFKKVINRIAFSAHLDESKNVLNGVYFSKDEDSKLLLVSTNGHRMSICKTEVIVEEDVNFIVPVKIFNF
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Known secondary structure (DSSP) GGGS
S
TTSTTTT
TT

SS

S


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence LKHLMSGEGMVKIKFSDKKFYVEFDNYKIACSLINGNYPDYKSIIPKEQKNKSLVSLGILKDRLARVNLY
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Known secondary structure (DSSP)

SSS
SSTT


S



GGGGS
S

SGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence VDKSRKLVLTFSELQLKLLGEDLITGRKGEFFIKDPNYLYDGADEVMAINISYFVEAISVFETSKIEIQF
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Known secondary structure (DSSP)

TT

SS
TTT

TTSS

TT

SS
 .........360.........370......
Sequence NSGNVLKLSEPENFNFTHLIMPMSLG
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Known secondary structure (DSSP)
TTS

TT

S

B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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