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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6degA_

Fold library idPDB HeaderMoleculeTitle
c6degA_2.45PDB header: dna binding proteinChain: A: PDB Molecule: beta sliding clamp;


Added to library: Sat Jun 2 08:28:28 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMRITVDRSQFFKSLGRVHRVVPILSNVLIDAENGSVQLKATDLDLEVTESFTVNIEKAGAITVPAYLLY
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Known secondary structure (DSSP)

TTT


TTTSTT
SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence DIVRKLPDGSEIVLSVDSAMSIVSGCTHFQLQCLPKIDFPQFGCRFFLSASKLKHLLDCTQFANGIYFHI
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Known secondary structure (DSSP) S
TT


TT
B
GGG


T

 .........150.........160.........170.........180.........190.........200.........210
Sequence VHDDVLKLRLVATDGHRLAQVDMEAPSGVDGMPGVIIPRKAVGELQKLLSEEIDGDVCIELSETKIRFSL
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Known secondary structure (DSSP)
SSS
TT

TT
TT


TS
S
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GSVVFTSKLVDGTFPDYQRVIPLGNDRKLIVNRQDFSSAVDRVSTISNDRGRAVKLTIEHGQLKLVVNNP
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Known secondary structure (DSSP) TT


S



GGGTS
S


GGGGSSS

TTT
 .........290.........300.........310.........320.........330.........340.........
Sequence DSGSAEDQLAATYTSEPLEIGFNSRYLLDIAGQLSSDEMVFMLSDAVAPALIRDNNNAEVLYVLMPVRV
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Known secondary structure (DSSP) TT


S



SS
SSSS
SS

S

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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