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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ddnB_

Fold library idPDB HeaderMoleculeTitle
c6ddnB_2.30PDB header: transport proteinChain: B: PDB Molecule: probable sulfate-binding lipoprotein subi;


Added to library: Sat May 18 08:20:07 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HTSITLVAYAVPEPGWSAVIPAFNASEQGRGVQVITSYGASADQSRGVADGKPADLVNFSVEPDIARLVK
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Known secondary structure (DSSP)


SS
TSTTTSS


TT


S
SST
 .........80.........90.........100.........110.........120.........130.........140
Sequence AGKVDKDWDADATKGIPFGSVVTFVVRAGNPKNIRDWDDLLRPGIEVITPSPLSSGSAKWNLLAPYAAKS
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Known secondary structure (DSSP) TTSB
GGGG
STTTT

TT
TT


SGGGGGSTT




TTT
ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence DGGRNNQAGIDFVNTLVNEHVKLRPGSGREATDVFVQGSGDVLISYENEAIATERAGKPVQHVTPPQTFK
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Known secondary structure (DSSP) TTTTS




SSTT

STT
S

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence IENPLAVVATSTHLGAATAFRNFQYTVQAQKLWAQAGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGS
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Known secondary structure (DSSP)
BTT
S
TTSTT

STTTTS


S
GGGGT
 .......
Sequence VDPQLFD
Predicted secondary structure

SS confidence






Known secondary structure (DSSP) TTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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