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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6d8kD_

Fold library idPDB HeaderMoleculeTitle
c6d8kD_2.65PDB header: hydrolaseChain: D: PDB Molecule: glycosyl hydrolase family 2, sugar binding domain protein;


Added to library: Sat Oct 20 08:48:30 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NITNVYGRDIRSLNGKWNAIIDLYDQGRGMKVYRNQSPKGNTDFYEYSFQGGLRLNVPGDWNSQTPELKY
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Known secondary structure (DSSP)

S
GGGS

TTS
TTTTTGGG




SSS


S

SSSS
SS
STTTSGGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YEGTVWYARHFDAKRLTHKRQFLYFGAVSYRCRVYLNGAEIGSHEGGFTPFQIEVTDLLNEGENFIAIEV
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Known secondary structure (DSSP)

S


SSS

BSTT
TTS

TTT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NNRRTKDAIPAMSFDWWNYGGITRDVLLVTTPQTYLEDYSFHEEIPQRMGRAFSEADAAMLLNEAKALGV
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Known secondary structure (DSSP)



SSSSS
S

SS



B

S
SS







SGGGT

STTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NMIRLAHYPQNEYTVRLAEKMGFILWQEIPVWQGIDFTNNNTRKKAQRMLSEMIKRDQNRCAVGYWGIAN
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Known secondary structure (DSSP) S
TTS


TT

S

TTS

S
TTT
TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ETLETGKQLDTTRLYVAAFFGGEALYGQSGDENVASSWSEEYQARLYRDNISPWILFDFRSPFRFHPTNQ
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Known secondary structure (DSSP)




SS








TT



TT
GGG

TT


S
SB

TT


TTTT
 .........360.........370.....
Sequence DGWNRKGLVSDQGIRKKAWYLMREY
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Known secondary structure (DSSP) SS


SB
TTS
B
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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