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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6d8kA_

Fold library idPDB HeaderMoleculeTitle
c6d8kA_2.65PDB header: hydrolaseChain: A: PDB Molecule: glycosyl hydrolase family 2, sugar binding domain protein;


Added to library: Sat Oct 20 08:47:55 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QNITNVYGRDIRSLNGKWNAIIDLYDQGRGMKVYRNQSPKGNTDFYEYSFQGGLRLNVPGDWNSQTPELK
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Known secondary structure (DSSP)


S
GGGS

TTS
TTTTTGGG




SSS


S

SSSS
SS
STTT
GGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YYEGTVWYARHFDAKRLTHKRQFLYFGAVSYRCRVYLNGAEIGSHEGGFTPFQIEVTDLLNEGENFIAIE
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Known secondary structure (DSSP) T

S


SS
S

BSTT
TTS

TTT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VNNRRTKDAIPAMSFDWWNYGGITRDVLLVTTPQTYLEDYFIQLDKESPNRMIAKVALSDKKAGEKITVS
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Known secondary structure (DSSP)



TTSSS
S

SS



B

S

SS

SS
TTSS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IPELKTSIDMLTDAEGKAETVFNIKKLERWSSENPKLYEVIVSSANDRVEEQIGFRNITVKGTDIYLNGK
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Known secondary structure (DSSP) GGGT

TTS
SS




SSS



SS




TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence PTFMCSISFHEEIPQRMGRAFSEADAAMLLNEAKALGVNMIRLAHYPQNEYTVRLAEKMGFILWQEIPVW
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Known secondary structure (DSSP)



STTTT

ST
S
TTS


T

S

 .........360.........370.........380.........390.........400.........410.........420
Sequence QGIDFTNNNTRKKAQRMLSEMIKRDQNRCAVGYWGIANETQPSKARNEFLTSLLETGKQLDTTRLYVAAF
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Known secondary structure (DSSP) TTS
TT
TTT
TT

SS



TT

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence DLVRFNREKKRFVMEDSFTSQLDVVAVNKYMGWYHPWPIEPENAVWEVIPDKPLIISEFGGEALYGQSGD
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Known secondary structure (DSSP)

TTTT

SGGGG
S

BTTTB

SS
GGG

SSTTS






TT



 .........500.........510.........520.........530.........540.........550.........560
Sequence ENVASSWSEEYQARLYRDNIRMFDNIPNLRGVSPWILFDFRSPFRFHPTNQDGWNRKGLVSDQGIRKKAW
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Known secondary structure (DSSP) TT
GGG

T
TT

S
SB

TT


TTTTTTTT
SB
TTS
B
 .........570
Sequence YLMREYYKTK
Predicted secondary structure


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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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