Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6d73B_

Fold library idPDB HeaderMoleculeTitle
c6d73B_3.80PDB header: transport proteinChain: B: PDB Molecule: transient receptor potential cation channel, subfamily m;


Added to library: Sat May 18 08:27:00 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LASWIKENIKKKEQWDKHRHVRETPTDAFGDISFGGLGQKTGKYVRVSSDTSCENLYQLMTEQWKLRSPN
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)



S




SSTT


SS

T




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLISVTGGAKNFYIKTHLKDKFRRGLIKVAQTTGAWILTGGTHAGVMKHVGMAVRDYTLSSGSMEGQIVV
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)


TTT



TT


BSSTSTTSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence IGVAPWGVIHNRSTLIHPEGRFPAYYSLDEQGQGRLSCLDINHTHFLLVDDGTQGHYGVEIELRARLEKL
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) TTTBTTGGGT


SSS


TT


TTSB
B
TT


S
SS
S
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence ISKLSLGGVTIPVVCVVLDGGPGTLNTIYNSMLNHTPCVVLEGSGRLADVIAHVASVPVSKVTMALINRL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) T
B



B


S

TTT

TTSTTT

S
TTTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LKRFFMQEYKNFTELQIIEWTKKIQDILRMPHLLTVFRIDEDKNYDVDVAILQALLKASRSDEHAGRHCW
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)

SSGGG

TSTTT


BTTTBSTSSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence ERQLELAVAWNRVDIAESEIFTEESQWTSSDLHPAMFSALVGDKPEFVRLLLENGVCVREFLEREETLCE
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) T
TS
TT



GGGTTT
TT

S
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence LYSHLPSCFFLRKLAKRVQEPLPGSRKVCLSHVSEEVRHLLGSFTQPLYIASRYDTVWDPGRDLFLWAVV
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)


S



SSSS




TTS

SSSS







 .........500.........510.........520.........530.........540.........550.........560
Sequence QNNRELAEIGWEQCRDCIAAALAASKILRKLAQESGEDDSEEATEMLELANHYEKQAIGVFSECHSWDAQ
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) S


SSS

SSS

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence RAQKLLIRISPSWGRSTCLWLALEAHDKSFIAHSGVQALLTQIWCGELSVDNPHWKVLLCMIFFPLIYTG
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) TB

SSSSS

STT
TTTSSSTTB
S
S

 .........640.........650.........660.........670.........680.........690.........700
Sequence FLTFRRDEDIQRQAERTEQQKNCSSRLMSFLKSPQVKFYWNIASYFGFLWLFAVVLMIDFQTSPSWRELL
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) T

B


T
TS

SS

 .........710.........720.........730.........740.........750.........760.........770
Sequence LYVWLTSLVCEEIRQLYHDGFRRKAKMYIKDLWNILDVLSIVLFIAGLICRLQASDTVFYIGKVILCIDF
Predicted secondary structure



SS confidence





































































Known secondary structure (DSSP)

TSSSSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence IIFCLRLMAIFSISRTLGPKIIIVRRMMLDLFFFMFLLSIWVVAYGVAKQGILIENEERLNWIIRGAVYE
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) T

S
SS
S


 .........850.........860.........870.........880.........890.........900.........910
Sequence PYITIFGNFPTNIDNTLFDISSCSVNASDPLKPKCPMLNADNTPVFPEWLTIMMLCVYLLFANILLLNLL
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) T


STTTT

TT
S

TT


SSS







SSSS
SS
 .........920.........930.........940.........950.........960.........970.........980
Sequence IAIFNYTFQEVQDNTDTIWKFQRYELIKEYHSRPALPPPFILLSHLILFIRGVFLRHKNFRQELEQTEEE
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) SSSS
SS



TTT
B


 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence ELLSWEAYMKDNYLASTRQDESQSVEHRIHDTAEKVGAMSELLEREQEMVXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) TS


 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence XXEEAPHMFARQLQYPDSTVRRFPVPEEKVSWEVNFSPYQPPVYNQQDKHRNPGGRTGIRGKGALNTLGP
Predicted secondary structure






























































SS confidence





































































Known secondary structure (DSSP)






GGG
SB
TTSS
B




STT
STTS

SS



B








TTS

S
BS
TTSSSSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence NHILHPIFTRWRDAEHKVLEFLAVWEDAEKRWALLGGPAQPDLAQVLERILGKKLKTLLKAGEEVYKGYV
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)



B

SS
TT

B
TTSSSS












S




S

 .........1200.........1210.........1220.........1230.........1240.........1250......
Sequence DDSRNTDNAWVETSIITLHTPLMADLNHMVESSLSSHQPLQWREVSSDACRCSYQREALRQIAHHH
Predicted secondary structure
































SS confidence

































































Known secondary structure (DSSP)

TT

SS








S



GGG
S

S

S
TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D