Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6d6uB_

Fold library idPDB HeaderMoleculeTitle
c6d6uB_3.80PDB header: transport proteinChain: B: PDB Molecule: gamma-aminobutyric acid receptor subunit alpha-1,gamma-


Added to library: Sat Jun 30 08:24:36 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DNTTVFTRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKG
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)

TTTT

TTS
S
SSSS

S




BTTTT


B
GGG



 .........80.........90.........100.........110.........120.........130.........140
Sequence PMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMD
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP) SSS
SSGGGTS




TTBSS

BSSSB

SSSB








TTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHL
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
SS

TTTSS
S
SS



SS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWF
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)

TTTS
SS
S


SS

TT
 .........290.........300.........310.........320.........330......
Sequence IAVCYAFVFSALIEFATVNYFTKSQPARAAKIDRLSRIAFPLLFGIFNLVYWATYL
Predicted secondary structure












SS confidence























































Known secondary structure (DSSP) TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D