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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6d26A_

Fold library idPDB HeaderMoleculeTitle
c6d26A_2.80PDB header: membrane protein/antagonistChain: A: PDB Molecule: prostaglandin d2 receptor 2, endolysin chimera;


Added to library: Sat Oct 6 09:08:21 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATLKPLCPILEQMSRLQSHSATSIRYIDHAAVLLHGLASLLGLVENGVILFVVGCRMRQTVVTTWVLHLA
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TT

SSSS






TS


 .........80.........90.........100.........110.........120.........130.........140
Sequence LSDLLASASLPFFTYFLAVGHSWELGTTFCKLHSSIFFLNMFASGFLLSAISLDRCLQVVRPVWAQNHRT
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Known secondary structure (DSSP) TS


S
S


 .........150.........160.........170.........180.........190.........200.........210
Sequence VAAAHKVCLVLWALAVLNTVPYFVFRDTISRLDGRIMCYYNVLLLNPGPDRDATCNSRQAALAVSKFLLA
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Known secondary structure (DSSP) SST
TTS

GGGS


S
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence FLVPLAIIASSHAAVSLRLQHRADLGLQHRNIFEMLRIDEGGGSGGDEAEKLFNQDVDAAVRGILRNAKL
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Known secondary structure (DSSP) TT
GGGSS




GGG
S
STTTTTSSS


STTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFR
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Known secondary structure (DSSP) TS

TT
TT
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TGTWDAYRRRPGRFVRLVAAVVAAFALCWGPYHVFSLLEARAHANPGLRPLVWRGLPFVTSLAFFNSVAN
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Known secondary structure (DSSP)




TTTS

SSSTTT
GGGTTTT
 .........430.........440......
Sequence PVLYVLTPDMLRKLRRSLRTVLESVL
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Known secondary structure (DSSP)

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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